bug#69273: closed ([PATCH] gnu: python-ega-download-client: Update to 5.1.0.)

[GNU bug Tracking System]

Your message dated Thu, 7 Mar 2024 19:37:21 +0100
with message-id <ZeoJYR4nvY840jSN@jurong>
and subject line Close
has caused the debbugs.gnu.org bug report #69273,
regarding [PATCH] gnu: python-ega-download-client: Update to 5.1.0.
to be marked as done.

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-- 
69273: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=69273
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> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: python-ega-download-client: Update to 5.1.0.
>
>
>
>
> Date: 
>
> Mon, 19 Feb 2024 15:42:22 +0000
>
>
>
>
> * gnu/packages/bioinformatics.scm (python-ega-download-client): Update to 5.1.0.
>
> Change-Id: I010c3a0e7cb69184b72e8b13bad04ff2fd364f5a
> ---
>  gnu/packages/bioinformatics.scm | 26 ++++++++++++++------------
>  1 file changed, 14 insertions(+), 12 deletions(-)
>
> diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
> index 85507b6c15..00a20aa4fc 100644
> --- a/gnu/packages/bioinformatics.scm
> +++ b/gnu/packages/bioinformatics.scm
> @@ -2541,18 +2541,20 @@ (define-public python-ega-download-client
>      (build-system pyproject-build-system)
>      (arguments
>       (list
> -      #:test-flags
> -      '(list "-k"
> -             ;; These tests fail because they require internet access.
> -             (string-append "not test_download.py"
> -                            " and not test_htsget.py"
> -                            " and not test_commands.py"))
> -      #:phases
> -      '(modify-phases %standard-phases
> -         (add-after 'unpack 'relax-requirements
> -           (lambda _
> -             (substitute* "setup.py"
> -               (("==") ">=")))))))
> +      #:test-flags '(list "-k"
> +                          ;; These tests fail because they require internet 
> access.
> +                          (string-append "not test_download.py"
> +                                         " and not test_htsget.py"
> +                                         " and not test_commands.py"
> +                          ;; The following 2 tests are failing with 
> MaxRetriesReachedError
> +                                         " and not test_download_file.py"
> +                                         " and not test_download_file.py"))
> +      #:phases '(modify-phases %standard-phases
> +                  (add-after 'unpack 'relax-requirements
> +                    (lambda _
> +                      (substitute* "setup.py"
> +                        (("==")
> +                         ">=")))))))
>      (propagated-inputs (list python-htsget python-psutil python-requests
>                               python-tqdm python-urllib3))
>      (native-inputs (list python-coverage python-pytest python-pyfakefs
>
> base-commit: 052ef145215d45e1fe0e179df3b8c9626e021c2b
> -- 
> 2.34.1
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> Close
>
>
>
>
> Date: 
>
> Thu, 7 Mar 2024 19:37:21 +0100
>
>
>
>
> The patch does not update the package, we are already at this version.
> Also it does not actually apply.
>
> Actually it looks as if the tests to be disabled by this patch have
> already been disabled in a different commit.
>
> So I am closing this bug, thanks!
>
> Andreas
>
>
>
> --- End Message ---