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Re: [Orgmode] a better way with babel
|
From: |
Eric Schulte |
|
Subject: |
Re: [Orgmode] a better way with babel |
|
Date: |
Thu, 01 Jul 2010 08:19:14 -0700 |
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User-agent: |
Gnus/5.13 (Gnus v5.13) Emacs/23.2 (gnu/linux) |
Of course, an updated patch is attached.
Best -- Eric
>From 5cbb38e25a2d2eae7c3c688d347f80619ecb8463 Mon Sep 17 00:00:00 2001
From: Eric Schulte <address@hidden>
Date: Thu, 1 Jul 2010 08:07:17 -0700
Subject: [PATCH] add short-names to #+captions with support for latex export
captions specified with the following syntax
#+CAPTION: [shortname]{longname}
will have their short and longnames handled appropriately.
Thanks to Robert Cunningham for suggesting this feature.
* lisp/org-exp.el (org-export-attach-captions-and-attributes): adding
a shortname attribute to caption strings under the symbol name
org-caption-shortn.
* lisp/org-latex.el (org-export-latex-tables): handling caption short
names on table export
(org-export-latex-convert-table.el-table): handling caption short
names on table.el type table export
(org-export-latex-links): handling caption short names on link/image
export
(org-export-latex-format-image): now takes an optional argument
specifying a caption short name
---
lisp/org-exp.el | 6 +++++-
lisp/org-latex.el | 20 +++++++++++++-------
2 files changed, 18 insertions(+), 8 deletions(-)
diff --git a/lisp/org-exp.el b/lisp/org-exp.el
index cf09799..80f6e11 100644
--- a/lisp/org-exp.el
+++ b/lisp/org-exp.el
@@ -1607,12 +1607,15 @@ table line. If it is a link, add it to the line
containing the link."
"^[ \t]*\\(|[^-]\\)"
"\\|"
"^[ \t]*\\[\\[.*\\]\\][ \t]*$"))
- cap attr label end)
+ cap shortn attr label end)
(while (re-search-forward re nil t)
(cond
((match-end 1)
(progn
(setq cap (concat cap (if cap " " "") (org-trim (match-string 1))))
+ (when (string-match "\\[\\(.*\\)\\]{\\(.*\\)}" cap)
+ (setq shortn (match-string 1 cap)
+ cap (match-string 2 cap)))
(delete-region (point-at-bol) (min (1+ (point-at-eol)) (point-max)))))
((match-end 2)
(progn
@@ -1629,6 +1632,7 @@ table line. If it is a link, add it to the line
containing the link."
(point-at-eol)))
(add-text-properties (point-at-bol) end
(list 'org-caption cap
+ 'org-caption-shortn shortn
'org-attributes attr
'org-label label))
(if label (push (cons label label) target-alist))
diff --git a/lisp/org-latex.el b/lisp/org-latex.el
index e800bc1..d725fc8 100644
--- a/lisp/org-latex.el
+++ b/lisp/org-latex.el
@@ -1576,7 +1576,7 @@ The conversion is made depending of STRING-BEFORE and
STRING-AFTER."
(org-table-last-column-widths (copy-sequence
org-table-last-column-widths))
fnum fields line lines olines gr colgropen line-fmt align
- caption label attr floatp longtblp)
+ caption shortn label attr floatp longtblp)
(if org-export-latex-tables-verbatim
(let* ((tbl (concat "\\begin{verbatim}\n" raw-table
"\\end{verbatim}\n")))
@@ -1585,6 +1585,8 @@ The conversion is made depending of STRING-BEFORE and
STRING-AFTER."
(progn
(setq caption (org-find-text-property-in-string
'org-caption raw-table)
+ shortn (org-find-text-property-in-string
+ 'org-caption-shortn raw-table)
attr (org-find-text-property-in-string
'org-attributes raw-table)
label (org-find-text-property-in-string
@@ -1652,8 +1654,8 @@ The conversion is made depending of STRING-BEFORE and
STRING-AFTER."
(if floatp "\\begin{table}[htb]\n"))
(if floatp
(format
- "\\caption{%s%s}"
- (if label (concat "\\\label{" label "}") "")
+ "\\caption%s{%s%s}"
+ (if shortn (concat "[" shortn "]") "")
(or caption "")))
(if (and longtblp caption) "\\\\\n" "\n")
(if (and org-export-latex-tables-centered (not
longtblp))
@@ -1680,10 +1682,11 @@ The conversion is made depending of STRING-BEFORE and
STRING-AFTER."
(defun org-export-latex-convert-table.el-table ()
"Replace table.el table at point with LaTeX code."
- (let (tbl caption label line floatp attr align rmlines)
+ (let (tbl caption shortn label line floatp attr align rmlines)
(setq line (buffer-substring (point-at-bol) (point-at-eol))
label (org-get-text-property-any 0 'org-label line)
caption (org-get-text-property-any 0 'org-caption line)
+ shortn (org-get-text-property-any 0 'org-caption-shortn line)
attr (org-get-text-property-any 0 'org-attributes line)
align (and attr (stringp attr)
(string-match "\\<align=\\([^ \t\n\r,]+\\)" attr)
@@ -1721,7 +1724,8 @@ The conversion is made depending of STRING-BEFORE and
STRING-AFTER."
(setq tbl (concat "\\begin{center}\n" tbl "\\end{center}")))
(when floatp
(setq tbl (concat "\\begin{table}\n"
- (format "\\caption{%s%s}\n"
+ (format "\\caption%s{%s%s}\n"
+ (if shortn (format "[%s]" shortn) "")
(if label (format "\\label{%s}" label) "")
(or caption ""))
tbl
@@ -1822,6 +1826,7 @@ The conversion is made depending of STRING-BEFORE and
STRING-AFTER."
"file")))
(coderefp (equal type "coderef"))
(caption (org-find-text-property-in-string 'org-caption raw-path))
+ (shortn (org-find-text-property-in-string 'org-caption-shortn
raw-path))
(attr (or (org-find-text-property-in-string 'org-attributes
raw-path)
(plist-get org-export-latex-options-plist
:latex-image-options)))
(label (org-find-text-property-in-string 'org-label raw-path))
@@ -1859,7 +1864,7 @@ The conversion is made depending of STRING-BEFORE and
STRING-AFTER."
(plist-get org-export-latex-options-plist :inline-images))
;; OK, we need to inline an image
(insert
- (org-export-latex-format-image raw-path caption label attr)))
+ (org-export-latex-format-image raw-path caption label attr
shortn)))
(coderefp
(insert (format
(org-export-get-coderef-format path desc)
@@ -1922,7 +1927,7 @@ The conversion is made depending of STRING-BEFORE and
STRING-AFTER."
(wrapp "\\begin{wrapfigure}%placement
\\centering
\\includegraphics[%attr]{%path}
-\\caption{%labelcmd%caption}
+\\caption%shortn{%labelcmd%caption}
\\end{wrapfigure}")
(multicolumnp "\\begin{figure*}%placement
\\centering
@@ -1953,6 +1958,7 @@ The conversion is made depending of STRING-BEFORE and
STRING-AFTER."
(expand-file-name path)
path))
(cons "attr" attr)
+ (cons "shortn" (if shortn (format "[%s]" shortn) ""))
(cons "labelcmd" (if label (format "\\label{%s}"
label)""))
(cons "caption" (or caption ""))
--
1.7.0.4
Carsten Dominik <address@hidden> writes:
> Hi Eric,
>
> I tried to apply the patch, but it does not apply cleanly, maybe due
> to other changes. Can I ask you to update and resubmit?
>
> Thanks!
>
> - Carsten
>
> On Jun 21, 2010, at 6:37 PM, Eric Schulte wrote:
>
>> Hi Robert,
>>
>> Thanks for the thoughtful message.
>>
>> I present a couple of solutions below.
>>
>> Robert Cunningham <address@hidden> writes:
>>
>>> G'day All,
>>>
>>> I wonder if I've missed something and there is a better way.
>>>
>>> Essentially I'm trying to use org babel with R and LaTeX to create
>>> figures
>>> with both long and short captions (for contents)
>>>
>>> I'd started with:
>>>
>>> #+CAPTION: Nice data (filled points indicate less nice data)
>>> #+LABEL: fig:nicedata
>>> #+ATTR_LaTeX: width=0.98\textwidth
>>> #+begin_src R :file ndata.pdf :width 1000 :height 617 :exports
>>> results
>>> dotchart(data$ndata)
>>> #+end_src
>>>
>>> which pointed to the need for long/short captions...
>>>
>>> feeling hopeful I tried:
>>>
>>> #+CAPTION: Nice data [Nice data (filled points indicate less nice
>>> data)]
>>> #+LABEL: fig:nicedata
>>> #+ATTR_LaTeX: width=0.98\textwidth
>>> #+begin_src R :file ndata.pdf :width 1000 :height 617 :exports
>>> results
>>> dotchart(data$ndata)
>>> #+end_src
>>>
>>
>> I'm attaching a patch [1] which adds shortname support for captions.
>> Once
>> applied, the following syntax will result in a caption with a
>> shortname
>> and a longname.
>>
>> --8<---------------cut here---------------start------------->8---
>> some pre-table text
>>
>> #+source: g-nicedata
>> #+begin_src gnuplot :file graph.png :exports results
>> plot sin(x)
>> #+end_src
>>
>> #+Caption: [nice data]{a longer description of the niceness of the
>> data}
>> #+results: g-nicedata
>> [[file:graph.png]]
>>
>> some post-table text
>> --8<---------------cut here---------------end--------------->8---
>>
>> however, while this patch is still pending there is an Org-babel
>> solution below which should work immediately.
>>
>>>
>>>
>>> but no luck there.
>>>
>>> Next effort was to try to use R and LaTex more directly with
>>> noweb. I tried
>>> this:
>>>
>>>
>>>
>>> #+srcname: r-nicedata
>>> #+begin_src R :session :file ndata.pdf :results output :exports
>>> results
>>> dotchart(data$ndata)
>>> #+end_src
>>>
>>>
>>> #+begin_src latex :noweb yes
>>> \begin{figure}[htb!]
>>> \centering
>>> \includegraphics[width=0.98\textwidth]{<<r-nicedata()>>}
>>> \caption[Nice data]{Nice data (filled points indicate less nice
>>> data)}
>>> \label{fig:nicedata}
>>> \end{figure}
>>> #+end_src
>>>
>>>
>>>
>>> This does produce the figure and long/short contents BUT ALSO
>>> produces this:
>>>
>>> #+results: r-nicedata
>>> [[file:ndata.pdf]]
>>>
>>> which upon export results in a link and consequently the plot
>>> appearing both
>>> in the figure and elsewhere. This second plot is unwelcome.
>>>
>>> I've tried assorted :results and :output options but have not found
>>> how to
>>> suppress the #+results: but still obtain the figure. I've always used
>>> the :session option.
>>>
>>> I've also tried twigging an org-export option to suppress pdf
>>> export but the
>>> link is still exported so that is not a solution.
>>>
>>> The current "working" solution is to use the noweb approach and
>>> then use sed
>>> to clean out the links to the second image-ugly to say the least!
>>>
>>
>> You were very close with the noweb approach. The following
>> combination
>> should work -- notice the ":results silent" header argument to the
>> source block.
>>
>> --8<---------------cut here---------------start------------->8---
>> some pre-table text
>>
>> #+source: g-nicedata
>> #+begin_src gnuplot :file graph.png :results silent :exports none
>> plot sin(x)
>> #+end_src
>>
>> #+begin_src latex :noweb yes
>> \begin{figure}[htb!]
>> \centering
>> \includegraphics[width=0.98\textwidth]{<<g-nicedata()>>}
>> \caption[Nice data]{some nice data -- filled points indicate less
>> nice data}
>> \label{fig:nicedata}
>> \end{figure}
>> #+end_src
>>
>> some post-table text
>> --8<---------------cut here---------------end--------------->8---
>>
>> is exported to the following latex,
>>
>> --8<---------------cut here---------------start------------->8---
>> some pre-table text
>>
>>
>>
>> \begin{figure}[htb!]
>> \centering
>> \includegraphics[width=0.98\textwidth]{graph.png}
>> \caption[Nice data]{some nice data -- filled points indicate less
>> nice data}
>> \label{fig:nicedata}
>> \end{figure}
>>
>> some post-table text
>> --8<---------------cut here---------------end--------------->8---
>>
>> Hope this helps,
>>
>> Best -- Eric
>>
>>>
>>>
>>>
>>> All this with org version 6.36c
>>>
>>>
>>> What have I missed? What is the best way to do this?
>>>
>>>
>>> Cheers,
>>>
>>> Robert Cunningham
>>>
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> Emacs-orgmode mailing list
>>> Please use `Reply All' to send replies to the list.
>>> address@hidden
>>> http://lists.gnu.org/mailman/listinfo/emacs-orgmode
>>
>> Footnotes:
>> [1] From 6a55dcab99bbd7840117b8390ab5db347d2573ef Mon Sep 17
>> 00:00:00 2001
>> From: Eric Schulte <address@hidden>
>> Date: Mon, 21 Jun 2010 09:02:37 -0700
>> Subject: [PATCH] add short-names to #+captions with support for
>> latex export
>>
>> captions specified with the following syntax
>> #+CAPTION: [shortname]{longname}
>> will have their short and longnames handled appropriately.
>>
>> Thanks to Robert Cunningham for suggesting this feature.
>>
>> * lisp/org-exp.el (org-export-attach-captions-and-attributes): adding
>> a shortname attribute to caption strings under the symbol name
>> org-caption-shortn.
>>
>> * lisp/org-latex.el (org-export-latex-tables): handling caption short
>> names on table export
>>
>> (org-export-latex-convert-table.el-table): handling caption short
>> names on table.el type table export
>>
>> (org-export-latex-links): handling caption short names on link/image
>> export
>>
>> (org-export-latex-format-image): now takes an optional argument
>> specifying a caption short name
>> ---
>> lisp/org-exp.el | 14 +++++++++-----
>> lisp/org-latex.el | 21 ++++++++++++++-------
>> 2 files changed, 23 insertions(+), 12 deletions(-)
>>
>> diff --git a/lisp/org-exp.el b/lisp/org-exp.el
>> index 029e4d7..466d7da 100644
>> --- a/lisp/org-exp.el
>> +++ b/lisp/org-exp.el
>> @@ -1256,7 +1256,7 @@ the current file."
>> (goto-char (point-min))
>> (while (re-search-forward org-bracket-link-regexp nil t)
>> (org-if-unprotected-at (1+ (match-beginning 0))
>> - (let* ((md (match-data))
>> + (let* ((md (match-data))
>> (desc (match-end 2))
>> (link (org-link-unescape (match-string 1)))
>> (slink (org-solidify-link-text link))
>> @@ -1381,8 +1381,8 @@ removed as well."
>> select-tags "\\|")
>> "\\):"))
>> (re-excl (concat ":\\(" (mapconcat 'regexp-quote
>> - exclude-tags "\\|")
>> - "\\):"))
>> + exclude-tags "\\|")
>> + "\\):"))
>> beg end cont)
>> (goto-char (point-min))
>> (when (and select-tags
>> @@ -1593,11 +1593,14 @@ table line. If it is a link, add it to the
>> line containing the link."
>> "^[ \t]*\\(|[^-]\\)"
>> "\\|"
>> "^[ \t]*\\[\\[.*\\]\\][ \t]*$"))
>> - cap attr label end)
>> + cap shortn attr label end)
>> (while (re-search-forward re nil t)
>> (cond
>> ((match-end 1)
>> - (setq cap (concat cap (if cap " " "") (org-trim (match-string 1)))))
>> + (setq cap (concat cap (if cap " " "") (org-trim (match-string 1))))
>> + (when (string-match "\\[\\(.*\\)\\]{\\(.*\\)}" cap)
>> + (setq shortn (match-string 1 cap)
>> + cap (match-string 2 cap))))
>> ((match-end 2)
>> (setq attr (concat attr (if attr " " "") (org-trim
>> (match-string 2)))))
>> ((match-end 3)
>> @@ -1609,6 +1612,7 @@ table line. If it is a link, add it to the
>> line containing the link."
>> (point-at-eol)))
>> (add-text-properties (point-at-bol) end
>> (list 'org-caption cap
>> + 'org-caption-shortn shortn
>> 'org-attributes attr
>> 'org-label label))
>> (if label (push (cons label label) target-alist))
>> diff --git a/lisp/org-latex.el b/lisp/org-latex.el
>> index 01a4b05..6c2aab2 100644
>> --- a/lisp/org-latex.el
>> +++ b/lisp/org-latex.el
>> @@ -1576,7 +1576,7 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>> (org-table-last-column-widths (copy-sequence
>> org-table-last-column-
>> widths))
>> fnum fields line lines olines gr colgropen line-fmt align
>> - caption label attr floatp longtblp)
>> + caption shortn label attr floatp longtblp)
>> (if org-export-latex-tables-verbatim
>> (let* ((tbl (concat "\\begin{verbatim}\n" raw-table
>> "\\end{verbatim}\n")))
>> @@ -1585,6 +1585,8 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>> (progn
>> (setq caption (org-find-text-property-in-string
>> 'org-caption raw-table)
>> + shortn (org-find-text-property-in-string
>> + 'org-caption-shortn raw-table)
>> attr (org-find-text-property-in-string
>> 'org-attributes raw-table)
>> label (org-find-text-property-in-string
>> @@ -1652,7 +1654,8 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>> (if floatp "\\begin{table}[htb]\n"))
>> (if floatp
>> (format
>> - "\\caption{%s%s}"
>> + "\\caption%s{%s%s}"
>> + (if shortn (concat "[" shortn "]") "")
>> (if label (concat "\\\label{" label
>> "}") "")
>> (or caption "")))
>> (if (and longtblp caption) "\\\\\n" "\n")
>> @@ -1680,10 +1683,11 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>>
>> (defun org-export-latex-convert-table.el-table ()
>> "Replace table.el table at point with LaTeX code."
>> - (let (tbl caption label line floatp attr align rmlines)
>> + (let (tbl caption shortn label line floatp attr align rmlines)
>> (setq line (buffer-substring (point-at-bol) (point-at-eol))
>> label (org-get-text-property-any 0 'org-label line)
>> caption (org-get-text-property-any 0 'org-caption line)
>> + shortn (org-get-text-property-any 0 'org-caption-shortn line)
>> attr (org-get-text-property-any 0 'org-attributes line)
>> align (and attr (stringp attr)
>> (string-match "\\<align=\\([^ \t\n\r,]+\\)" attr)
>> @@ -1721,7 +1725,8 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>> (setq tbl (concat "\\begin{center}\n" tbl "\\end{center}")))
>> (when floatp
>> (setq tbl (concat "\\begin{table}\n"
>> - (format "\\caption{%s%s}\n"
>> + (format "\\caption%s{%s%s}\n"
>> + (if shortn (format "[%s]" shortn) "")
>> (if label (format "\\label{%s}" label) "")
>> (or caption ""))
>> tbl
>> @@ -1822,6 +1827,7 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>> "file")))
>> (coderefp (equal type "coderef"))
>> (caption (org-find-text-property-in-string 'org-caption
>> raw-
>> path))
>> + (shortn (org-find-text-property-in-string
>> org-caption-shortn raw-path))
>> (attr (or (org-find-text-property-in-string
>> org-attributes raw-
>> path)
>> (plist-get org-export-latex-options-plist
>> :latex-image-
>> options)))
>> (label (org-find-text-property-in-string 'org-label raw-path))
>> @@ -1859,7 +1865,7 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>> (plist-get org-export-latex-options-plist :inline-images))
>> ;; OK, we need to inline an image
>> (insert
>> - (org-export-latex-format-image raw-path caption label attr)))
>> + (org-export-latex-format-image raw-path caption label
>> attr shortn)))
>> (coderefp
>> (insert (format
>> (org-export-get-coderef-format path desc)
>> @@ -1889,7 +1895,7 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>> (t (insert "\\texttt{" desc "}")))))))
>>
>>
>> -(defun org-export-latex-format-image (path caption label attr)
>> +(defun org-export-latex-format-image (path caption label attr
>> &optional shortn)
>> "Format the image element, depending on user settings."
>> (let (ind floatp wrapp multicolumnp placement figenv)
>> (setq floatp (or caption label))
>> @@ -1932,7 +1938,7 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>> (floatp "\\begin{figure}%placement
>> \\centering
>> \\includegraphics[%attr]{%path}
>> -\\caption{%labelcmd%caption}
>> +\\caption%shortn{%labelcmd%caption}
>> \\end{figure}")
>> (t "\\includegraphics[%attr]{%path}")))
>>
>> @@ -1953,6 +1959,7 @@ The conversion is made depending of STRING-
>> BEFORE and STRING-AFTER."
>> (expand-file-name path)
>> path))
>> (cons "attr" attr)
>> + (cons "shortn" (if shortn (format "[%s]" shortn) ""))
>> (cons "labelcmd" (if label (format "\\label{%s}"
>> label)""))
>> (cons "caption" (or caption ""))
>> --
>> 1.7.0.4
>>
>> _______________________________________________
>> Emacs-orgmode mailing list
>> Please use `Reply All' to send replies to the list.
>> address@hidden
>> http://lists.gnu.org/mailman/listinfo/emacs-orgmode
>
> - Carsten