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Re: [Orgmode] Reproducible Research Template


From: Andy Choens
Subject: Re: [Orgmode] Reproducible Research Template
Date: Wed, 05 Jan 2011 12:24:28 -0500


On Wed, 2011-01-05 at 06:24 -1000, Thomas S. Dye wrote:
Most of my projects store data in a MySQL database.  My projects 
define queries that relate tables to one another, but the results are 
typically something that Org-mode understands---a flat table or a 
single value.  The reproducible research functions that I write break 
the analysis workflow down into separate tasks so that the results of 
a SQL query are written to the Org-mode buffer.  Subsequent steps in 
the workflow refer to the named results block.  This way, the Org-mode 
project contains the actual data used in the analysis without the need 
to reproduce a relational structure.  The functions that access the 
SQL database go in the local library of babel because I don't want to 
give users of a RR document direct access to my database.


That is very interesting. I like the idea of separating the database queries from the flat table results. This is similar to my situation. The actual storage of the data is relational, but the queries needed to assess the data result in either flat tables or single values. Very good idea.
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