Re: [O] R code block produces only partial output

[Andreas Kiermeier]

On 5 August 2014 13:30, John Hendy <address@hidden> wrote:
> I can reproduce with a minimal config and on Linux (to toss in a
> confirmation). I *also* accidentally just stumbled on a way I can
> toggle the behavior between correct and incorrect! It arose because my
> file was not able to use the #+PROPERTY settings you have -- my
> results were not obeying what I had set. I looked around and believe
> the syntax is correct per this page:
> - http://orgmode.org/manual/Header-arguments-in-Org-mode-properties.html

Thanks for confirming this John!
I couldn't see how the #+PROPERTY settings I had differed from those
in the link ... I recall getting them from there (but maybe I mistyped
something?). So I copied what you provided for the rest of my testing.

Getting rid of :session all together did produce the correct results
for me, too. However, including a :session in either #+PROPERTY or at
the beginning of the code block did not - irrespective of whether I
used *R* or simply r.

> Correct results:
>
> #+begin_src org
>
> #+STARTUP: showall indent hidestars
> #+PROPERTY: header-args:R :session r
>
> #+BEGIN_SRC R :results output drawer
>   require(rms)
>   set.seed(123)
>   x <- rnorm(100)
>   describe(x)
> #+END_SRC

[snip]

So, this example did *not* work for me.

> The reason, I think, is this (also correct):
>
> #+begin_src org
>
> #+STARTUP: showall indent hidestars
>
>
> #+BEGIN_SRC R :results output drawer
>   require(rms)
>   set.seed(123)
>   x <- rnorm(100)
>   describe(x)
> #+END_SRC

Yes, without a session it seems to work fine.

Thanks,

Andreas