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[O] Bug: org-babel-tangle fails with :comments org [8.3beta (release_8.3
|
From: |
Titus von der Malsburg |
|
Subject: |
[O] Bug: org-babel-tangle fails with :comments org [8.3beta (release_8.3beta-1286-g20795f @ /home/malsburg/usr/share/emacs/site-lisp/org/)] |
|
Date: |
Sun, 31 Jan 2016 12:08:42 -0800 |
|
User-agent: |
mu4e 0.9.15; emacs 25.0.50.1 |
Remember to cover the basics, that is, what you expected to happen and
what in fact did happen. You don't know how to make a good report? See
http://orgmode.org/manual/Feedback.html#Feedback
Your bug report will be posted to the Org-mode mailing list.
------------------------------------------------------------------------
I used the following org-mode document:
#+PROPERTY: header-args:R :tangle yes :comments org
* Test
Text for testing.
#+BEGIN_SRC R
message(1)
#+END_SRC
#+BEGIN_SRC R
message(2)
#+END_SRC
When I `org-babel-tangle', this fails after the first code block is
written. Stacktrace below. Tested with current development versions of
Emacs and org-mode.
Debugger entered--Lisp error: (error "Nothing to comment")
signal(error ("Nothing to comment"))
error("Nothing to comment")
comment-region-default(1 3 nil)
comment-region(1 3)
#[(text) "\205&\303\230?\205& G\304V\205&\n\203 c\207\305`
c\210`\"\210\306\210\307c\207" [comments text
org-babel-tangle-uncomment-comments "no" 0 comment-region nil "\n"] 3](#("\n\n"
0 1 (font-lock-fontified t fontified t face org-block-end-line) 1 2
(font-lock-fontified t fontified t)))
org-babel-spec-to-string((12 "/tmp/test2.org" "file:/tmp/test2.org::*Test"
Test:1 ((:colname-names) (:rowname-names) (:result-params "replace")
(:result-type . value) (:comments . "org") (:shebang . "") (:cache . "no")
(:padline . "") (:noweb . "no") (:tangle . "yes") (:exports . "code") (:results
. "replace") (:hlines . "no") (:session . "none")) "message(2)" #("\n\n" 0 1
(font-lock-fontified t fontified t face org-block-end-line) 1 2
(font-lock-fontified t fontified t))))
#[(spec) "\306\211\307!\310!\211G\311V\205 \n)\312! \313\230\203%\314\315
!\2027 \316\230\203/\317\2027 G\311V\2057 \211\205P,\203O
\313\230\203O
\320,Q\202P
\211-\205\321!\322-!.\211/\203w.\203w/\316\230\204w\323.\324\"\210*\325-!\203\217-\326\327*\"\235\204\217\330-!\210\331\332!0r0q\210\333\216\3341!\203\247\317\335\336\217\210 \203\277-2\235\204\277 \337Pc\210-2B2\3403!\210\341
4\331\332!5r5q\210\342\216\325-!\203\340\343-!\210db\210\344\345\34638\"A\316\230\204\371`eU\204\371\337c\2104c\210\347\317\211-#\210. \203\f\204\3506T6\351\352-\fB\317\353$.\207"
[get-spec tangle sheb she-bang tangle-mode base-name #[(name) "\302\303
8\"A\207" [name spec assoc 4] 4] :tangle :shebang 0 :tangle-mode "yes"
file-name-sans-extension buffer-file-name "no" nil "." :mkdirp
file-name-directory make-directory parents file-exists-p mapcar car delete-file
generate-new-buffer " *temp*" ((byte-code "\301!\203\n\302!\210\301\207"
[temp-buffer buffer-name kill-buffer] 2)) fboundp (funcall lang-f) ((error))
"\n" org-babel-spec-to-string buffer-string ((byte-code
"\301!\203\n\302!\210\301\207" [temp-buffer buffer-name kill-buffer] 2))
insert-file-contents assoc :padline 4 write-region 493 add-to-list
path-collector #[(a b) "@ @\232\207" [a b] 2] ext file-name fnd m temp-buffer
lang-f ...] 6]((12 "/tmp/test2.org" "file:/tmp/test2.org::*Test" Test:1
((:colname-names) (:rowname-names) (:result-params "replace") (:result-type .
value) (:comments . "org") (:shebang . "") (:cache . "no") (:padline . "")
(:noweb . "no") (:tangle . "yes") (:exports . "code") (:results . "replace")
(:hlines . "no") (:session . "none")) "message(2)" #("\n\n" 0 1
(font-lock-fontified t fontified t face org-block-end-line) 1 2
(font-lock-fontified t fontified t))))
mapc(#[(spec) "\306\211\307!\310!\211G\311V\205 \n)\312!
\313\230\203%\314\315 !\2027 \316\230\203/\317\2027 G\311V\2057
\211\205P,\203O \313\230\203O
\320,Q\202P
\211-\205\321!\322-!.\211/\203w.\203w/\316\230\204w\323.\324\"\210*\325-!\203\217-\326\327*\"\235\204\217\330-!\210\331\332!0r0q\210\333\216\3341!\203\247\317\335\336\217\210 \203\277-2\235\204\277 \337Pc\210-2B2\3403!\210\341
4\331\332!5r5q\210\342\216\325-!\203\340\343-!\210db\210\344\345\34638\"A\316\230\204\371`eU\204\371\337c\2104c\210\347\317\211-#\210. \203\f\204\3506T6\351\352-\fB\317\353$.\207"
[get-spec tangle sheb she-bang tangle-mode base-name #[(name) "\302\303
8\"A\207" [name spec assoc 4] 4] :tangle :shebang 0 :tangle-mode "yes"
file-name-sans-extension buffer-file-name "no" nil "." :mkdirp
file-name-directory make-directory parents file-exists-p mapcar car delete-file
generate-new-buffer " *temp*" ((byte-code "\301!\203\n\302!\210\301\207"
[temp-buffer buffer-name kill-buffer] 2)) fboundp (funcall lang-f) ((error))
"\n" org-babel-spec-to-string buffer-string ((byte-code
"\301!\203\n\302!\210\301\207" [temp-buffer buffer-name kill-buffer] 2))
insert-file-contents assoc :padline 4 write-region 493 add-to-list
path-collector #[(a b) "@ @\232\207" [a b] 2] ext file-name fnd m temp-buffer
lang-f ...] 6] ((8 "/tmp/test2.org" "file:/tmp/test2.org::*Test" Test:1
((:colname-names) (:rowname-names) (:result-params "replace") (:result-type .
value) (:comments . "org") (:shebang . "") (:cache . "no") (:padline . "")
(:noweb . "no") (:tangle . "yes") (:exports . "code") (:results . "replace")
(:hlines . "no") (:session . "none")) "message(1)" #("Test\n\nText for
testing.\n\n" 0 4 (fontified t face org-level-1) 4 5 (fontified t) 5 6
(fontified t) 6 24 (fontified t) 24 25 (fontified t))) (12 "/tmp/test2.org"
"file:/tmp/test2.org::*Test" Test:1 ((:colname-names) (:rowname-names)
(:result-params "replace") (:result-type . value) (:comments . "org") (:shebang
. "") (:cache . "no") (:padline . "") (:noweb . "no") (:tangle . "yes")
(:exports . "code") (:results . "replace") (:hlines . "no") (:session .
"none")) "message(2)" #("\n\n" 0 1 (font-lock-fontified t fontified t face
org-block-end-line) 1 2 (font-lock-fontified t fontified t)))))
#[(by-lang) "address@hidden \"A\206 \307\306
\"A\203#\310\306 \"A!\206$ \311P!
\312\313\314\n\"-\207" [by-lang lang specs org-babel-tangle-lang-exts ext
org-src-lang-modes assoc intern symbol-name "-mode" nil mapc #[(spec)
"\306\211\307!\310!\211G\311V\205 \n)\312! \313\230\203%\314\315 !\2027
\316\230\203/\317\2027 G\311V\2057 \211\205P,\203O \313\230\203O
\320,Q\202P
\211-\205\321!\322-!.\211/\203w.\203w/\316\230\204w\323.\324\"\210*\325-!\203\217-\326\327*\"\235\204\217\330-!\210\331\332!0r0q\210\333\216\3341!\203\247\317\335\336\217\210 \203\277-2\235\204\277 \337Pc\210-2B2\3403!\210\341
4\331\332!5r5q\210\342\216\325-!\203\340\343-!\210db\210\344\345\34638\"A\316\230\204\371`eU\204\371\337c\2104c\210\347\317\211-#\210. \203\f\204\3506T6\351\352-\fB\317\353$.\207"
[get-spec tangle sheb she-bang tangle-mode base-name #[(name) "\302\303
8\"A\207" [name spec assoc 4] 4] :tangle :shebang 0 :tangle-mode "yes"
file-name-sans-extension buffer-file-name "no" nil "." :mkdirp
file-name-directory make-directory parents file-exists-p mapcar car delete-file
generate-new-buffer " *temp*" ((byte-code "\301!\203\n\302!\210\301\207"
[temp-buffer buffer-name kill-buffer] 2)) fboundp (funcall lang-f) ((error))
"\n" org-babel-spec-to-string buffer-string ((byte-code
"\301!\203\n\302!\210\301\207" [temp-buffer buffer-name kill-buffer] 2))
insert-file-contents assoc :padline 4 write-region 493 add-to-list
path-collector #[(a b) "@ @\232\207" [a b] 2] ext file-name fnd m temp-buffer
lang-f ...] 6] lang-f she-banged] 5](("R" (8 "/tmp/test2.org"
"file:/tmp/test2.org::*Test" Test:1 ((:colname-names) (:rowname-names)
(:result-params "replace") (:result-type . value) (:comments . "org") (:shebang
. "") (:cache . "no") (:padline . "") (:noweb . "no") (:tangle . "yes")
(:exports . "code") (:results . "replace") (:hlines . "no") (:session .
"none")) "message(1)" #("Test\n\nText for testing.\n\n" 0 4 (fontified t face
org-level-1) 4 5 (fontified t) 5 6 (fontified t) 6 24 (fontified t) 24 25
(fontified t))) (12 "/tmp/test2.org" "file:/tmp/test2.org::*Test" Test:1
((:colname-names) (:rowname-names) (:result-params "replace") (:result-type .
value) (:comments . "org") (:shebang . "") (:cache . "no") (:padline . "")
(:noweb . "no") (:tangle . "yes") (:exports . "code") (:results . "replace")
(:hlines . "no") (:session . "none")) "message(2)" #("\n\n" 0 1
(font-lock-fontified t fontified t face org-block-end-line) 1 2
(font-lock-fontified t fontified t)))))
mapc(#[(by-lang) "address@hidden \"A\206 \307\306
\"A\203#\310\306 \"A!\206$ \311P!
\312\313\314\n\"-\207" [by-lang lang specs org-babel-tangle-lang-exts ext
org-src-lang-modes assoc intern symbol-name "-mode" nil mapc #[(spec)
"\306\211\307!\310!\211G\311V\205 \n)\312! \313\230\203%\314\315 !\2027
\316\230\203/\317\2027 G\311V\2057 \211\205P,\203O \313\230\203O
\320,Q\202P
\211-\205\321!\322-!.\211/\203w.\203w/\316\230\204w\323.\324\"\210*\325-!\203\217-\326\327*\"\235\204\217\330-!\210\331\332!0r0q\210\333\216\3341!\203\247\317\335\336\217\210 \203\277-2\235\204\277 \337Pc\210-2B2\3403!\210\341
4\331\332!5r5q\210\342\216\325-!\203\340\343-!\210db\210\344\345\34638\"A\316\230\204\371`eU\204\371\337c\2104c\210\347\317\211-#\210. \203\f\204\3506T6\351\352-\fB\317\353$.\207"
[get-spec tangle sheb she-bang tangle-mode base-name #[(name) "\302\303
8\"A\207" [name spec assoc 4] 4] :tangle :shebang 0 :tangle-mode "yes"
file-name-sans-extension buffer-file-name "no" nil "." :mkdirp
file-name-directory make-directory parents file-exists-p mapcar car delete-file
generate-new-buffer " *temp*" ((byte-code "\301!\203\n\302!\210\301\207"
[temp-buffer buffer-name kill-buffer] 2)) fboundp (funcall lang-f) ((error))
"\n" org-babel-spec-to-string buffer-string ((byte-code
"\301!\203\n\302!\210\301\207" [temp-buffer buffer-name kill-buffer] 2))
insert-file-contents assoc :padline 4 write-region 493 add-to-list
path-collector #[(a b) "@ @\232\207" [a b] 2] ext file-name fnd m temp-buffer
lang-f ...] 6] lang-f she-banged] 5] (("R" (8 "/tmp/test2.org"
"file:/tmp/test2.org::*Test" Test:1 ((:colname-names) (:rowname-names)
(:result-params "replace") (:result-type . value) (:comments . "org") (:shebang
. "") (:cache . "no") (:padline . "") (:noweb . "no") (:tangle . "yes")
(:exports . "code") (:results . "replace") (:hlines . "no") (:session .
"none")) "message(1)" #("Test\n\nText for testing.\n\n" 0 4 (fontified t face
org-level-1) 4 5 (fontified t) 5 6 (fontified t) 6 24 (fontified t) 24 25
(fontified t))) (12 "/tmp/test2.org" "file:/tmp/test2.org::*Test" Test:1
((:colname-names) (:rowname-names) (:result-params "replace") (:result-type .
value) (:comments . "org") (:shebang . "") (:cache . "no") (:padline . "")
(:noweb . "no") (:tangle . "yes") (:exports . "code") (:results . "replace")
(:hlines . "no") (:session . "none")) "message(2)" #("\n\n" 0 1
(font-lock-fontified t fontified t face org-block-end-line) 1 2
(font-lock-fontified t fontified t))))))
org-babel-tangle(nil)
funcall-interactively(org-babel-tangle nil)
call-interactively(org-babel-tangle record nil)
command-execute(org-babel-tangle record)
helm-M-x(nil "org-babel-tangle")
funcall-interactively(helm-M-x nil "org-babel-tangle")
call-interactively(helm-M-x nil nil)
command-execute(helm-M-x)
Emacs : GNU Emacs 25.0.50.1 (x86_64-unknown-linux-gnu, GTK+ Version 3.14.13)
of 2016-01-18
Package: Org-mode version 8.3beta (release_8.3beta-1286-g20795f @
/home/malsburg/usr/share/emacs/site-lisp/org/)
current state:
==============
(setq
org-tab-first-hook '(org-hide-block-toggle-maybe
org-babel-hide-result-toggle-maybe org-babel-header-arg-expand)
org-latex-classes '(("g-brief" "\\documentclass[12pt]{g-brief}"
("\\section{%s}" . "\\section*{%s}")
("\\subsection{%s}" . "\\subsection*{%s}") ("\\subsubsection{%s}" .
"\\subsubsection*{%s}")
("\\paragraph{%s}" . "\\paragraph*{%s}") ("\\subparagraph{%s}" .
"\\subparagraph*{%s}"))
("beamerposter"
"\\documentclass[final,hyperref={pdfpagelabels=false}]{beamer}\n
\\usepackage{times}\n \\usepackage{amsmath,amsthm, amssymb, latexsym}\n
\\boldmath\n \\renewcommand\\maketitle{}\n
\\usepackage[english]{babel}\n \\usepackage[utf8]{inputenc}\n
\\usepackage[orientation=portrait,size=a0,scale=1.4,debug]{beamerposter}\n
[NO-DEFAULT-PACKAGES]"
("\\section{%s}" . "\\section*{%s}") ("\\subsection{%s}" .
"\\subsection*{%s}")
("\\subsubsection{%s}" . "\\subsubsection*{%s}") ("\\paragraph{%s}" .
"\\paragraph*{%s}")
("\\subparagraph{%s}" . "\\subparagraph*{%s}"))
("letter" "\\documentclass[12pt]{letter}" ("\\section{%s}" . "\\section*{%s}")
("\\subsection{%s}" . "\\subsection*{%s}") ("\\subsubsection{%s}" .
"\\subsubsection*{%s}")
("\\paragraph{%s}" . "\\paragraph*{%s}") ("\\subparagraph{%s}" .
"\\subparagraph*{%s}"))
("article" "\\documentclass[11pt]{article}" ("\\section{%s}" .
"\\section*{%s}")
("\\subsection{%s}" . "\\subsection*{%s}") ("\\subsubsection{%s}" .
"\\subsubsection*{%s}")
("\\paragraph{%s}" . "\\paragraph*{%s}") ("\\subparagraph{%s}" .
"\\subparagraph*{%s}"))
("report" "\\documentclass[11pt]{report}" ("\\part{%s}" . "\\part*{%s}")
("\\chapter{%s}" . "\\chapter*{%s}") ("\\section{%s}" .
"\\section*{%s}")
("\\subsection{%s}" . "\\subsection*{%s}") ("\\subsubsection{%s}" .
"\\subsubsection*{%s}"))
("book" "\\documentclass[11pt]{book}" ("\\part{%s}" . "\\part*{%s}")
("\\chapter{%s}" . "\\chapter*{%s}") ("\\section{%s}" .
"\\section*{%s}")
("\\subsection{%s}" . "\\subsection*{%s}") ("\\subsubsection{%s}" .
"\\subsubsection*{%s}"))
)
org-contacts-files '("/home/malsburg/Essentials/documents/contacts.org")
org-speed-command-hook '(org-speed-command-default-hook
org-babel-speed-command-hook)
org-reverse-note-order t
org-occur-hook '(org-first-headline-recenter)
org-metaup-hook '(org-babel-load-in-session-maybe)
org-html-format-drawer-function '(lambda (name contents) contents)
org-log-done t
org-latex-format-inlinetask-function
'org-latex-format-inlinetask-default-function
org-confirm-shell-link-function 'yes-or-no-p
org-ascii-format-inlinetask-function 'org-ascii-format-inlinetask-default
org-latex-pdf-process '("pdflatex -interaction nonstopmode -output-directory
%o %f" "biber `basename %f .tex`"
"pdflatex -interaction nonstopmode -output-directory %o %f"
"pdflatex -interaction nonstopmode -output-directory %o %f")
org-latex-format-headline-function 'org-latex-format-headline-default-function
org-default-notes-file "/home/malsburg/Essentials/documents/all.org"
org-todo-keyword-faces '(("WAIT" . "orange"))
org-capture-templates '(("b" "BibTeX article" plain
(file
"/home/malsburg/Documents/Uni/Bibliographie/bibliography.bib")
"@article{%^{BibTeX key},\n author = {%^{author}},\n
title = {%^{title}},\n journal = {%^{journal}},\n volume = {%^{volume}},\n
number = {%^{number}},\n pages = {%^{pages}},\n year = {%^{year}},\n doi =
{%^{doi}},\n keywords = {%^{keywords}},\n abstract = {}\n}" :prepend nil)
("c" "Org-contact" entry (file tmalsburg-contacts-file
:prepend nil)
"* %?\n :PROPERTIES:\n :N:
SURNAME;GIVEN;MIDDLE;PREFIX;SUFFIX\n :PHOTO: URI\n :BDAY:\n :ADDRESS: (WORK,
pref)\n :PHONE: (CELL, VOICE)\n :PHONE: (WORK, FAX)\n :EMAIL: (INTERNET,
WORK, pref)\n :TITLE:\n :ROLE:\n :ORG: DEPT;INST;* \n :URL: \n :NOTE:\n
:REV: %t\n :END:\n" :prepend nil)
("i" "Idiom" entry
(file
"/home/malsburg/Documents/Sprachen/English/idioms.org" :prepend nil) "* %?\n
%i")
("j" "Journal" entry (file+olp tmalsburg-agenda-file
"Journal") "* %? %T\n %i" :prepend t)
("n" "Notes" entry (file+olp tmalsburg-agenda-file "Notes") "*
%? %t\n %i" :prepend t)
("p" "Password" entry (file+olp tmalsburg-secrets-file
"Webseiten and Email accounts")
"* %?")
("t" "To do" entry (file+olp tmalsburg-agenda-file "Agenda"
"TODO") "* TODO %?\n %i"
:prepend t)
("m" "May do" entry (file+olp tmalsburg-agenda-file "Agenda"
"MAYDO") "* MAYDO %?\n %i"
:prepend t)
("r" "To read" entry (file+olp tmalsburg-agenda-file "Agenda"
"READ") "* READ %?\n %i"
:prepend t)
("d" "Done" entry (file+olp tmalsburg-agenda-file "Agenda"
"DONE")
"* DONE %?\n CLOSED: %U\n %i" :prepend t)
)
org-after-todo-state-change-hook '(org-clock-out-if-current)
org-latex-format-drawer-function '(lambda (name contents) contents)
org-capture-mode-hook '(evil-insert-state)
org-from-is-user-regexp "\\<Titus von der Malsburg\\>"
org-src-mode-hook '(org-src-babel-configure-edit-buffer
org-src-mode-configure-edit-buffer)
org-agenda-before-write-hook '(org-agenda-add-entry-text)
org-babel-pre-tangle-hook '(save-buffer)
org-mode-hook '(#[nil "\300\301\302\303\304$\207"
[org-add-hook change-major-mode-hook org-show-block-all append local] 5]
#[nil
"\300\301\302\303\304$\207"
[org-add-hook change-major-mode-hook org-babel-show-result-all append local] 5]
org-babel-result-hide-spec org-babel-hide-all-hashes)
org-archive-hook '(org-attach-archive-delete-maybe)
org-ascii-format-drawer-function '(lambda (name contents width) contents)
org-ctrl-c-ctrl-c-hook '(org-babel-hash-at-point
org-babel-execute-safely-maybe)
org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers
org-cycle-show-empty-lines
org-optimize-window-after-visibility-change)
org-archive-mark-done t
org-ditaa-eps-jar-path
"/home/malsburg/usr/share/emacs/site-lisp/contrib/scripts/DitaaEps.jar"
org-todo-keywords '((sequence "TODO" "READ" "MAYDO" "WAIT" "|" "DONE" "NODO"
"DELEGATED"))
org-babel-tangle-lang-exts '(("python" . "py") ("emacs-lisp" . "el") ("elisp"
. "el"))
org-confirm-elisp-link-function 'yes-or-no-p
org-metadown-hook '(org-babel-pop-to-session-maybe)
org-ditaa-jar-path "/home/malsburg/usr/src/org-mode/contrib/scripts/ditaa.jar"
org-html-format-headline-function 'org-html-format-headline-default-function
org-babel-load-languages '((python . t) (emacs-lisp . t) (ditaa . t) (R . t))
org-src-preserve-indentation t
org-html-format-inlinetask-function
'org-html-format-inlinetask-default-function
org-agenda-files '("/home/malsburg/Essentials/documents/all.org")
org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
org-confirm-babel-evaluate nil
)
signature.asc
Description: PGP signature
- [O] Bug: org-babel-tangle fails with :comments org [8.3beta (release_8.3beta-1286-g20795f @ /home/malsburg/usr/share/emacs/site-lisp/org/)],
Titus von der Malsburg <=