espressomd-maintainer
[Top][All Lists]
Advanced

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

[Espressomd-maintainer] Build failed in Jenkins: master-multiconfig-comp


From: Jenkins Demon
Subject: [Espressomd-maintainer] Build failed in Jenkins: master-multiconfig-compile » immersed_boundaries #43
Date: Mon, 2 May 2016 16:24:54 +0200 (CEST)

See 
<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=immersed_boundaries/43/changes>

Changes:

[Florian Weik] random: Reimplementet state gathering.

[Florian Weik] random: Reimplementet state gathering.

[Florian Weik] random:...

[Florian Weik] random: State can now be checkpointed again.

[Florian Weik] maintainer: NEWS

[Florian Weik] travis: Added boost mpi.

[Florian Weik] random: Fix const issue.

[Florian Weik] testsuite: Made langevin_per_particle test deterministic. This 
time for

------------------------------------------
[...truncated 516 lines...]
  CXX      angle_cossquare.lo
  CXX      angledist.lo
  CXX      dihedral.lo
  CXX      endangledist.lo
  CXX      fene.lo
  CXX      harmonic_dumbbell.lo
  CXX      harmonic.lo
  CXX      quartic.lo
  CXX      overlap.lo
  CXX      umbrella.lo
  CXX      bonded_coulomb.lo
  CXX      subt_lj.lo
  CXX      object-in-fluid/oif_global_forces.lo
  CXX      object-in-fluid/oif_local_forces.lo
  CXX      object-in-fluid/out_direction.lo
  CXX      hydrogen_bond.lo
  CXX      twist_stack.lo
  CXX      debye_hueckel.lo
  CXX      elc.lo
  CXX      magnetic_non_p3m_methods.lo
  CXX      mdlc_correction.lo
  CXX      maggs.lo
  CXX      mmm1d.lo
  CXX      mmm2d.lo
  CXX      mmm-common.lo
  CXX      p3m.lo
  CXX      p3m-common.lo
  CXX      p3m-dipolar.lo
  CXX      reaction_field.lo
  GEN      config-version.cpp
  NVCC     cuda_init_cuda.lo
  NVCC     cuda_common_cuda.lo
  NVCC     electrokinetics_cuda.lo
  NVCC     fd-electrostatics_cuda.lo
  NVCC     lbgpu_cuda.lo
  NVCC     p3m_gpu_cuda.lo
  NVCC     EspressoSystemInterface_cuda.lo
  NVCC     integrate_sd_cuda.lo
  NVCC     integrate_sd_cuda_kernel.lo
  NVCC     integrate_sd_cuda_debug.lo
  NVCC     integrate_sd_matrix.lo
  NVCC     integrate_sd_cuda_device.lo
  NVCC     actor/Mmm1dgpuForce_cuda.lo
  NVCC     actor/EwaldGPU_cuda.lo
  NVCC     actor/HarmonicWell_cuda.lo
  NVCC     immersed_boundary/ibm_cuda.lo
  NVCC     actor/DipolarDirectSum_cuda.lo
  NVCC     actor/HarmonicOrientationWell_cuda.lo
  NVCC     p3m_gpu_error_cuda.lo
  CXX      utils/statistics/RunningAverage.lo
  CXX      object-in-fluid/affinity.lo
  CXX      object-in-fluid/membrane_collision.lo
  CXX      immersed_boundary/ibm_main.lo
  CXX      immersed_boundary/ibm_triel.lo
  CXX      immersed_boundary/ibm_volume_conservation.lo
  CXX      immersed_boundary/ibm_tribend.lo
  CXX      immersed_boundary/ibm_cuda_interface.lo
  CXX      actor/ActorList.lo
  CXX      actor/HarmonicWell.lo
  CXX      actor/HarmonicOrientationWell.lo
  CXX      actor/Mmm1dgpuForce.lo
  CXX      actor/EwaldGPU.lo
  CXX      actor/DipolarDirectSum.lo
  CXX      config-version.lo
  CXXLD    libEspresso.la
make[5]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=immersed_boundaries/ws/src/core'>
make[4]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=immersed_boundaries/ws/src/core'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=immersed_boundaries/ws/src/core'>
Making all in tcl
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=immersed_boundaries/ws/src/tcl'>
  CXX      bin_tcl.lo
  CXX      binary_file_tcl.lo
  CXX      blockfile_tcl.lo
  CXX      h5mdfile_tcl.lo
  CXX      rotate_system_tcl.lo
  CXX      readpdb_tcl.lo
  CXX      cells_tcl.lo
  CXX      channels_tcl.lo
  CXX      collision_tcl.lo
  CXX      comfixed_tcl.lo
  CXX      comforce_tcl.lo
  CXX      config_tcl.lo
  CXX      constraint_tcl.lo
  CXX      domain_decomposition_tcl.lo
  CXX      electrokinetics_tcl.lo
  CXX      external_potential_tcl.lo
  CXX      energy_tcl.lo
  CXX      galilei_tcl.lo
  CXX      global_tcl.lo
  CXX      grid_tcl.lo
  CXX      iccp3m_tcl.lo
  CXX      imd_tcl.lo
  CXX      initialize_interpreter.lo
  CXX      integrate_tcl.lo
  CXX      interaction_data_tcl.lo
  CXX      lb-boundaries_tcl.lo
  CXX      lb_tcl.lo
  CXX      lees_edwards_tcl.lo
  CXX      metadynamics_tcl.lo
  CXX      nemd_tcl.lo
  CXX      mol_cut_tcl.lo
  CXX      parser.lo
  CXX      particle_data_tcl.lo
  CXX      polymer_tcl.lo
  CXX      pressure_tcl.lo
  CXX      random_tcl.lo
  CXX      reaction_tcl.lo
  CXX      rattle_tcl.lo
  CXX      statistics_chain_tcl.lo
  CXX      statistics_cluster_tcl.lo
  CXX      statistics_correlation_tcl.lo
  CXX      statistics_fluid_tcl.lo
  CXX      statistics_observable_tcl.lo
  CXX      statistics_wallstuff_tcl.lo
  CXX      statistics_tcl.lo
  CXX      thermostat_tcl.lo
  CXX      topology_tcl.lo
  CXX      tuning_tcl.lo
  CXX      uwerr_tcl.lo
  CXX      virtual_sites_com_tcl.lo
  CXX      ghmc_tcl.lo
  CXX      twist_stack_tcl.lo
  CXX      hydrogen_bond_tcl.lo
  CXX      minimize_energy_tcl.lo
  CXX      integrate_sd_tcl.lo
  CXX      mpiio_tcl.lo
  CXX      bmhtf-nacl_tcl.lo
  CXX      buckingham_tcl.lo
  CXX      cos2_tcl.lo
  CXX      dpd_tcl.lo
  CXX      forcecap_tcl.lo
  CXX      gaussian_tcl.lo
  CXX      gb_tcl.lo
  CXX      hat_tcl.lo
  CXX      hertzian_tcl.lo
  CXX      lj_tcl.lo
  CXX      ljangle_tcl.lo
  CXX      ljcos2_tcl.lo
  CXX      ljcos_tcl.lo
  CXX      ljgen_tcl.lo
  CXX      morse_tcl.lo
  CXX      soft_sphere_tcl.lo
  CXX      steppot_tcl.lo
  CXX      tab_tcl.lo
  CXX      tunable_slip_tcl.lo
  CXX      angle_tcl.lo
  CXX      angle_harmonic_tcl.lo
  CXX      angle_cosine_tcl.lo
  CXX      angle_cossquare_tcl.lo
  CXX      angledist_tcl.lo
  CXX      dihedral_tcl.lo
  CXX      endangledist_tcl.lo
  CXX      fene_tcl.lo
  CXX      harmonic_dumbbell_tcl.lo
  CXX      harmonic_tcl.lo
  CXX      quartic_tcl.lo
  CXX      bonded_coulomb_tcl.lo
  CXX      overlap_tcl.lo
  CXX      subt_lj_tcl.lo
  CXX      umbrella_tcl.lo
  CXX      object-in-fluid/oif_global_forces_tcl.lo
  CXX      object-in-fluid/oif_local_forces_tcl.lo
  CXX      object-in-fluid/out_direction_tcl.lo
  CXX      debye_hueckel_tcl.lo
  CXX      elc_tcl.lo
  CXX      magnetic_non_p3m_methods_tcl.lo
  CXX      maggs_tcl.lo
  CXX      mmm1d_tcl.lo
  CXX      mmm2d_tcl.lo
  CXX      p3m-dipolar_tcl.lo
  CXX      p3m_tcl.lo
  CXX      reaction_field_tcl.lo
  CXX      mdlc_correction_tcl.lo
  CXX      cuda_init_tcl.lo
  CXX      Espresso_install-scriptsdir.o
  CXX      Espresso_install-main.o
  NVCC     cuda_workaround.o
  CXX      Espresso-scriptsdir.o
  CXX      Espresso-main.o
  CXX      object-in-fluid/affinity_tcl.lo
  CXX      object-in-fluid/membrane_collision_tcl.lo
  CXX      immersed_boundary/ibm_triel_tcl.lo
  CXX      immersed_boundary/ibm_volume_conservation_tcl.lo
  CXX      immersed_boundary/ibm_tribend_tcl.lo
  CXX      actor/Mmm1dgpu_tcl.lo
  CXX      actor/Ewaldgpu_tcl.lo
  CXX      actor/DipolarDirectSum_tcl.lo
  CXX      actor/HarmonicWell_tcl.lo
  CXX      actor/HarmonicOrientationWell_tcl.lo
  CXXLD    libEspressoTcl.la
  CXXLD    Espresso.install
  CXXLD    Espresso
../core/.libs/libEspresso.so: .undefined reference to. 
`/boost:core:mpi/:.:libscommunicator/::libEspresso.socommunicator:( 
ompi_communicator_tundefined*  constreference& , toboost 
:`:boostmpi::::comm_create_kindmpi):'
:..communicator/:core/:.communicatorlibs(/libEspresso.soompi_communicator_t:*  
undefinedconst reference& ,to  
`boostboost::::archivempi::::detail:comm_create_kind:)basic_iarchive'::
basic_iarchive.(.unsigned/ intcore)/'
..libs.//core/libEspresso.so.:libs/ libEspresso.soundefined:  undefined 
referencereference  toto  
``boost:boost::mpi::archive:communicator::::operatordetail 
:ompi_communicator_t:*(basic_iarchive) :const:'
basic_iarchive.(.unsigned/ core/int.)libs'/
libEspresso.so.:. /undefinedcore reference/ .tolibs 
`/boostlibEspresso.so:::archive :undefined: detail:reference: 
shared_ptr_helper:to: shared_ptr_helper`(boost)':
:..mpi/:core:/.communicatorlibs:/:libEspresso.so:operator  undefined 
ompi_communicator_treference* to( )` boost:const:'archive
:.:.detail/::coreshared_ptr_helper/::.~libsshared_ptr_helper/()libEspresso.so':
. ./undefinedcore /.referencelibs /tolibEspresso.so :` boostundefined 
:reference: archiveto: 
`:boostdetail:::mpi:::shared_ptr_helperexception::::exception(shared_ptr_helperchar(
 )const'*
, .int.)'/
.core.//core/..libslibs//libEspresso.solibEspresso.so::  undefined 
undefinedreference  toreference ` vtableto  for` 
boostboost::::mpiarchive::::exception'detail
.:.:/coreshared_ptr_helper/.:libs:/~libEspresso.so:shared_ptr_helper 
(undefined) reference' 
to .`.typeinfo/ forcore /boost:.:libsarchive/::libEspresso.sodetail:: 
:undefinedbasic_iarchive' 
reference.. /tocore /`.libsboost/libEspresso.so::: undefinedmpi :reference: 
toexception :`:boost:exception:(mpichar:: communicatorconst::*communicator,() 
'int
)..'/
core./..libs//libEspresso.socore:/ undefined. libsreference /to 
libEspresso.so`boost:: :mpiundefined: :exceptionreference: :~toexception 
(`)'vtable
. .for/ core/boost.:libs:/mpilibEspresso.so:: :undefined exceptionreference' 
to .`.boost:/:corempi:/:.exceptionlibs::/~exceptionlibEspresso.so(:) '
undefined. ./referencecore /to. libs/`libEspresso.sotypeinfo:  undefinedfor 
reference  boostto: 
:`boostarchive::::archivedetail:::detail:::basic_iarchivebasic_oarchive:':
basic_oarchive(.unsigned. /intcore)'/
..libs.//core/libEspresso.so.libs:/ libEspresso.so:undefined  
undefinedreference  referenceto  to 
``boostboost:::archive:::mpidetail::::basic_oarchive:communicator::end_preamble(:)'communicator
.(.)/core'/
.libs./.libEspresso.so/: coreundefined/ .referencelibs /to libEspresso.so`:void 
 boost:undefined: mpi:reference: communicatorto: 
:`send<boostboost::::mpimpi::::packed_oarchive>exception(:int:, ~intexception, 
(boost)::'mpi
::.packed_oarchive .const/&core) /const.'libs
./.libEspresso.so/:core /.undefinedlibs/ libEspresso.soreference:  undefinedto  
reference `toboost `:boost:::mpimpi::::status 
exceptionboost::::mpi~::exceptioncommunicator:(:)recv'<
boost.:.:/mpi:core:/packed_iarchive>.(libsint,/ intlibEspresso.so,:  
boost::undefinedmpi ::referencepacked_iarchive &to)  `constboost'
:.:.archive/:core/:.libsdetail/libEspresso.so::: undefinedbasic_oarchive 
:reference :tobasic_oarchive `(typeinfounsigned for  intboost:):'mpi
:.:.exception/'
core./../libscore//.libslibEspresso.so/:libEspresso.so:  undefinedundefined  
referencereference  to to` 
boost:`:boostarchive::::detailarchive:::basic_iarchive:::detail~:basic_iarchive(:)'basic_oarchive
:.:./end_preamblecore(/).'libs
/libEspresso.so.:. /undefinedcore /reference .tolibs `/typeinfolibEspresso.so 
:for  boostundefined: :referencearchive :to: detail:`:voidbasic_oarchive' 
boost..:/:core/mpi.:libs/:libEspresso.socommunicator:: :undefined sendreference 
<to 
boost`:boost::mpi:archive::::detailpacked_oarchive::>basic_oarchive(::int~,basic_oarchive
 ()int',
 boost::mpi::packed_oarchive const&) const'
../core/.libs/libEspresso.so: undefined reference to `boost::mpi::status 
boost::mpi::communicator::recv<boost::mpi::packed_iarchive>(int, int, 
boostcollect2: error: ld returned 1 exit status
::mpi::packed_iarchive&) const'
../core/.libs/libEspresso.so: undefined reference to `typeinfo for 
boost::mpi::exception'
../core/.libs/libEspresso.so: undefined reference to 
`boost::archive::detail::basic_iarchive::~basic_iarchive()'
../core/.libs/libEspresso.so: undefined reference to `typeinfo for 
boost::archive::detail::basic_oarchive'
../core/.libs/libEspresso.so: undefined reference to 
`boost::archive::detail::basic_oarchive::~basic_oarchive()'
collect2: error: ld returned 1 exit status
Makefile:884: recipe for target 'Espresso' failed
make[3]: *** [Espresso] Error 1
make[3]: *** Waiting for unfinished jobs....
Makefile:888: recipe for target 'Espresso.install' failed
make[3]: *** [Espresso.install] Error 1
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=immersed_boundaries/ws/src/tcl'>
Makefile:449: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=immersed_boundaries/ws/src'>
Makefile:387: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=immersed_boundaries/ws/src'>
Makefile:475: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE



reply via email to

[Prev in Thread] Current Thread [Next in Thread]