[Gsrc-commit] trunk r3758: update mafft to 7.294

[Carl Hansen]

------------------------------------------------------------
revno: 3758
revision-id: address@hidden
parent: address@hidden
committer: address@hidden
branch nick: trunk
timestamp: Mon 2016-06-20 22:37:57 -0700
message:
  update mafft to 7.294
modified:
  pkg/bio/mafft/Makefile         makefile-20160617195624-kwz1a09vkg4le6fu-122
  pkg/bio/mafft/sha256sums       sha256sums-20160617195624-kwz1a09vkg4le6fu-123

=== modified file 'pkg/bio/mafft/Makefile'
--- a/pkg/bio/mafft/Makefile    2016-06-17 19:57:40 +0000
+++ b/pkg/bio/mafft/Makefile    2016-06-21 05:37:57 +0000
@@ -17,7 +17,8 @@
 
 NAME = MAFFT
 GARNAME = mafft
-GARVERSION = 7.205
+#old GARVERSION = 7.205
+GARVERSION = 7.294
 HOME_URL = http://mafft.cbrc.jp/alignment/software/
 DESCRIPTION = A multiple sequence alignment program
 define BLURB
@@ -31,7 +32,8 @@
 
 MASTER_SITES = http://mafft.cbrc.jp/
 MASTER_SUBDIR = alignment/software/
-DISTNAME = $(GARNAME)-$(GARVERSION)-without-extensions
+#DISTNAME = $(GARNAME)-$(GARVERSION)-without-extensions
+DISTNAME = $(GARNAME)-$(GARVERSION)-with-extensions
 DISTFILES = $(DISTNAME)-src.tgz
 # PATCHFILES = $(GARNAME)-$(GARVERSION)-destdir-install.patch
 WORKSRC = $(WORKDIR)/$(DISTNAME)/core
@@ -65,8 +67,8 @@
        done
        rm -f $(packageprefix)/bin/mafft-profile
        rm -f $(packageprefix)/bin/mafft-profile.exe
-       ln -s $(packagedir)/libexec/mafft-profile 
$(packageprefix)/bin/mafft-profile
+       ln -s $(packagedir)/libexec/mafft/mafft-profile 
$(packageprefix)/bin/mafft-profile
        rm -f $(packageprefix)/bin/mafft-distance
        rm -f $(packageprefix)/bin/mafft-distance.exe
-       ln -s $(packagedir)/libexec/mafft-distance 
$(packageprefix)/bin/mafft-distance
+       ln -s $(packagedir)/libexec/mafft/mafft-distance 
$(packageprefix)/bin/mafft-distance
        $(MAKECOOKIE)

=== modified file 'pkg/bio/mafft/sha256sums'
--- a/pkg/bio/mafft/sha256sums  2016-06-17 19:57:40 +0000
+++ b/pkg/bio/mafft/sha256sums  2016-06-21 05:37:57 +0000
@@ -1,1 +1,1 @@
-8c114d22b69be0e15ffcf3e4337d9333c6c4523b9c5903b88a893efd0d7f9400  
download/mafft-7.205-without-extensions-src.tgz
+94f65d6a116e16e13b16c2916d70113a36693216f5ada015d48868077a515c8a  
download/mafft-7.294-with-extensions-src.tgz