[Gsrc-commit] trunk r4844: update weeder to 2.0.1

[Carl Hansen]

------------------------------------------------------------
revno: 4844
revision-id: address@hidden
parent: address@hidden
committer: address@hidden
branch nick: trunk
timestamp: Fri 2017-10-20 11:45:32 -0700
message:
  update weeder to 2.0.1
modified:
  pkg/bio/weeder/Makefile        makefile-20160617195624-kwz1a09vkg4le6fu-199
  pkg/bio/weeder/sha256sums      sha256sums-20160617195624-kwz1a09vkg4le6fu-200

=== modified file 'pkg/bio/weeder/Makefile'
--- a/pkg/bio/weeder/Makefile   2016-06-17 19:57:40 +0000
+++ b/pkg/bio/weeder/Makefile   2017-10-20 18:45:32 +0000
@@ -1,4 +1,5 @@
 # Copyright © 2013, 2014 Brandon Invergo <address@hidden>
+# Copyright © 2017 Carl Hansen <address@hidden>
 #
 # This file is part of GSRC.
 #
@@ -17,9 +18,10 @@
 
 NAME = Weeder
 GARNAME = weeder
-GARVERSION = 2.0
+GARVERSION = 2.0.1
 HOME_URL = http://159.149.160.51/modtools/
-DESCRIPTION = Motif discovery in sequences from co-regulated genes
+       # see also  https://omictools.com/weeder-tool
+DESCRIPTION = MOtif discovery in nucleotide sequences from co-regulated genes
 define BLURB
 Weeder is a tool for transcription factor binding motif discovery from
 co-regulated genes of a single species.  It has been optimized for
@@ -28,19 +30,24 @@
 LICENSE = GPLv3
 CITE = PMID:16845071
 
+# The executable is called "weeder2"
+
 ######################################################################
-
+# http://159.149.160.51/modtools/downloads/weeder2.0.1.tar.gz
 MASTER_SITES = http://159.149.160.51/
 MASTER_SUBDIR = modtools/downloads/
 DISTNAME = $(GARNAME)$(GARVERSION)
 DISTFILES = $(DISTNAME).tar.gz
-EXTRACTDIR = $(WORKSRC)
+#EXTRACTDIR = $(WORKSRC)
+WORKSRC= $(WORKDIR)/Weeder2.0/
 BUILD_SCRIPTS = bin
 INSTALL_SCRIPTS = data bin
 
 BUILDDEPS =
 LIBDEPS =
 
+
+
 ######################################################################
 
 include ../../../gar/gar.mk
@@ -61,3 +68,6 @@
        install -m755 $(WORKSRC)/weeder2 $(packageprefix)/share/weeder2/weeder2
        $(SYMLINK_BIN) $(prefix)/share/weeder2/weeder2 weeder2
        $(MAKECOOKIE)
+
+
+

=== modified file 'pkg/bio/weeder/sha256sums'
--- a/pkg/bio/weeder/sha256sums 2016-06-17 19:57:40 +0000
+++ b/pkg/bio/weeder/sha256sums 2017-10-20 18:45:32 +0000
@@ -1,1 +1,1 @@
-1bd21b26369a1cd90c59af3b94c9cacd516308231b27da9475af250b58b6ad33  
download/weeder2.0.tar.gz
+94f5de83a7389da1bf30b8752d7018ef643387e8de428f47b026b12202508357  
download/weeder2.0.1.tar.gz