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01/03: gnu: samtools: disable tests for non-64-bit systems


From: Ludovic Courtès
Subject: 01/03: gnu: samtools: disable tests for non-64-bit systems
Date: Tue, 16 Dec 2014 17:17:20 +0000

civodul pushed a commit to branch master
in repository guix.

commit f3cd952b45ea0bb788287fda03ebe796eb9461b8
Author: Ricardo Wurmus <address@hidden>
Date:   Mon Dec 15 12:36:10 2014 +0100

    gnu: samtools: disable tests for non-64-bit systems
    
    * gnu/packages/bioinformatics.scm (samtools): disable tests for all 
non-64-bit
      systems because of an upstream bug in the test data.
    
    Signed-off-by: Ludovic Courtès <address@hidden>
---
 gnu/packages/bioinformatics.scm |    9 ++++++++-
 1 files changed, 8 insertions(+), 1 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6f6178a..7e80227 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -43,7 +43,14 @@
          "1y5p2hs4gif891b4ik20275a8xf3qrr1zh9wpysp4g8m0g1jckf2"))))
     (build-system gnu-build-system)
     (arguments
-     '(#:make-flags (list (string-append "prefix=" (assoc-ref %outputs "out")))
+     `(;; There are 87 test failures when building on non-64-bit architectures
+       ;; due to invalid test data.  This has since been fixed upstream (see
+       ;; <https://github.com/samtools/samtools/pull/307>), but as there has
+       ;; not been a new release we disable the tests for all non-64-bit
+       ;; systems.
+       #:tests? ,(string=? (or (%current-system) (%current-target-system))
+                           "x86_64-linux")
+       #:make-flags (list (string-append "prefix=" (assoc-ref %outputs "out")))
        #:phases
        (alist-cons-after
         'unpack



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