branch gnome-updates updated (ad1b7d8 -> 4e9d04a)

[Mark H. Weaver]

mhw pushed a change to branch gnome-updates
in repository guix.

      from  ad1b7d8   gnu: yelp: Add gsettings-desktop-schemas to inputs.
      adds  e411ce1   gnu: poppler: Fix CVE-2015-8868.
      adds  200dac0   syscalls: statfs: Add missing 'mount-flags' field of 
'struct statfs'.
      adds  96f2a43   syscalls: 'statfs' explicitly binds 'statfs64'.
      adds  3135b95   gnu: bootstrap: Add case for i686-mingw.
      adds  55f4b4e   gnu: ao: Format the description string.
      adds  2df092a   gnu: ao: Replace "itemize" with "enumerate" in 
description string.
      adds  a66a60f   gnu: Add synthv1.
      adds  1b90e57   gnu: Add antiword.
      adds  dfc9d18   gnu: qtractor: Update to 0.7.7.
      adds  d706d94   gnu: guitarix: Update to 0.35.0.
      adds  63bcec7   gnu: Add python2-shedskin.
      adds  acb31b5   gnu: asymptote: Update to 2.37.
      adds  00cd419   syscalls: Implement arrays in 'define-c-struct' and use 
it.
      adds  ae4ff9f   syscalls: Add 'tcgetattr' and 'tcsetattr' bindings.
      adds  cba9620   gnu: ruby-hashery: Update to 2.1.2.
      adds  b74f64a   gnu: Add r-xnomial.
      adds  04100c3   gnu: Add java-qdox-1.12.
      adds  e7e2851   gnu: Add java-jarjar.
      adds  87c31a2   gnu: Add java-hamcrest-core.
      adds  d0184f4   gnu: Add java-junit.
      adds  4c48bf5   gnu: powertop: Patch absolute file names.
      adds  62063d8   gnu: Add reposurgeon.
      adds  aacb52f   gnu: Add portmidi.
      adds  f65d59f   gnu: Add python-pyportmidi.
      adds  6855b34   gnu: frescobaldi: Add MIDI support.
      adds  73124d3   gnu: bristol: Do not check for JACK with ldd.
      adds  3854f3d   gnu: ocaml: Fix CVE-2015-8869.
      adds  4c6aa73   gnu: Add 4store.
      adds  0a17fd7   gnu: wpa-supplicant: Add fixes for CVE-2016-{4476,4477}.
      adds  a8f3424   syscalls: Wrap TCSA* constants in 'tcsetattr-action' 
macro.
      adds  efc4eb1   gnu: cross: Use CROSS_*_INCLUDE_PATH for system headers.
      adds  e760ec4   gnu: gcc: Add 6.1.0.
      adds  3c1d298   gnu: openssl: Replace with 1.0.2h [security fixes].
      adds  5b8a854   gnu: Rename redeclipse package to red-eclipse.
      adds  5ef819c   gnu: redeclipse: Rename to red-eclipse.
      adds  1b39a19   gnu: Add nlopt.
      adds  0a0884c   gnu: cross: Fix typo.
      adds  940f8d3   gnu: pinentry: Rename to pinentry-gtk2.
      adds  c607b70   gnu: Add pinentry-tty.
      adds  54df755   gnu: Add pinentry-qt.
      adds  83b84fa   gnu: edirect: Update to 4.10.
      adds  ac47ad9   gnu: bitlbee: Update to 3.4.2.
      adds  11057c4   gnu: bitlbee: Incorporate upstream pre-release patches.
       new  4e9d04a   Merge branch 'master' into gnome-updates

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 gnu/local.mk                                       |    9 +
 gnu/packages/admin.scm                             |    7 +-
 gnu/packages/bioinformatics.scm                    |    8 +-
 gnu/packages/commencement.scm                      |    3 +
 gnu/packages/cross-base.scm                        |   67 ++--
 gnu/packages/databases.scm                         |   53 ++++
 gnu/packages/games.scm                             |    4 +-
 gnu/packages/gcc.scm                               |   15 +-
 gnu/packages/gnupg.scm                             |   42 ++-
 gnu/packages/java.scm                              |  190 ++++++++++++
 gnu/packages/linux.scm                             |   26 +-
 gnu/packages/maths.scm                             |   39 +++
 gnu/packages/messaging.scm                         |   25 +-
 gnu/packages/music.scm                             |   73 +++++
 gnu/packages/ocaml.scm                             |    3 +-
 gnu/packages/patches/4store-fix-buildsystem.patch  |   56 ++++
 .../patches/gcc-cross-environment-variables.patch  |   51 ++-
 gnu/packages/patches/ocaml-CVE-2015-8869.patch     |   72 +++++
 gnu/packages/patches/portmidi-modular-build.patch  |  325 ++++++++++++++++++++
 .../patches/wpa-supplicant-CVE-2016-4476.patch     |   82 +++++
 .../patches/wpa-supplicant-CVE-2016-4477-pt1.patch |   51 +++
 .../patches/wpa-supplicant-CVE-2016-4477-pt2.patch |   82 +++++
 .../patches/wpa-supplicant-CVE-2016-4477-pt3.patch |   62 ++++
 .../patches/wpa-supplicant-CVE-2016-4477-pt4.patch |   50 +++
 gnu/packages/tls.scm                               |   20 ++
 gnu/packages/version-control.scm                   |   56 +++-
 guix/build/syscalls.scm                            |   16 +-
 tests/syscalls.scm                                 |    2 +-
 28 files changed, 1416 insertions(+), 73 deletions(-)
 create mode 100644 gnu/packages/patches/4store-fix-buildsystem.patch
 create mode 100644 gnu/packages/patches/ocaml-CVE-2015-8869.patch
 create mode 100644 gnu/packages/patches/portmidi-modular-build.patch
 create mode 100644 gnu/packages/patches/wpa-supplicant-CVE-2016-4476.patch
 create mode 100644 gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt1.patch
 create mode 100644 gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt2.patch
 create mode 100644 gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt3.patch
 create mode 100644 gnu/packages/patches/wpa-supplicant-CVE-2016-4477-pt4.patch