[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
01/01: gnu: fasttree: Update to 2.1.9.
|
From: |
Ben Woodcroft |
|
Subject: |
01/01: gnu: fasttree: Update to 2.1.9. |
|
Date: |
Sat, 23 Jul 2016 05:15:55 +0000 (UTC) |
benwoodcroft pushed a commit to branch master
in repository guix.
commit e03a51530450e85f88dd36ad459f06950eb906ea
Author: Ben Woodcroft <address@hidden>
Date: Sat Jul 23 15:15:12 2016 +1000
gnu: fasttree: Update to 2.1.9.
* gnu/packages/bioinformatics.scm (fasttree): Update to 2.1.9.
---
gnu/packages/bioinformatics.scm | 64 +++++++++++++++++++--------------------
1 file changed, 32 insertions(+), 32 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5cd92b8..6065a00 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1831,7 +1831,7 @@ similarity of community members.")
(define-public fasttree
(package
(name "fasttree")
- (version "2.1.8")
+ (version "2.1.9")
(source (origin
(method url-fetch)
(uri (string-append
@@ -1839,7 +1839,7 @@ similarity of community members.")
version ".c"))
(sha256
(base32
- "0dzqc9vr9iiiw21y159xfjl2z90vw0y7r4x6456pcaxiy5hd2wmi"))))
+ "0ljvvw8i1als1wbfzvrf15c3ii2vw9db20a259g6pzg34xyyb97k"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no "check" target
@@ -1848,37 +1848,37 @@ similarity of community members.")
(delete 'unpack)
(delete 'configure)
(replace 'build
- (lambda* (#:key source #:allow-other-keys)
- (and (zero? (system* "gcc"
- "-O3"
- "-finline-functions"
- "-funroll-loops"
- "-Wall"
- "-o"
- "FastTree"
- source
- "-lm"))
- (zero? (system* "gcc"
- "-DOPENMP"
- "-fopenmp"
- "-O3"
- "-finline-functions"
- "-funroll-loops"
- "-Wall"
- "-o"
- "FastTreeMP"
- source
- "-lm")))))
+ (lambda* (#:key source #:allow-other-keys)
+ (and (zero? (system* "gcc"
+ "-O3"
+ "-finline-functions"
+ "-funroll-loops"
+ "-Wall"
+ "-o"
+ "FastTree"
+ source
+ "-lm"))
+ (zero? (system* "gcc"
+ "-DOPENMP"
+ "-fopenmp"
+ "-O3"
+ "-finline-functions"
+ "-funroll-loops"
+ "-Wall"
+ "-o"
+ "FastTreeMP"
+ source
+ "-lm")))))
(replace 'install
- (lambda* (#:key outputs #:allow-other-keys)
- (let ((bin (string-append (assoc-ref outputs "out")
- "/bin")))
- (mkdir-p bin)
- (copy-file "FastTree"
- (string-append bin "/FastTree"))
- (copy-file "FastTreeMP"
- (string-append bin "/FastTreeMP"))
- #t))))))
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((bin (string-append (assoc-ref outputs "out")
+ "/bin")))
+ (mkdir-p bin)
+ (copy-file "FastTree"
+ (string-append bin "/FastTree"))
+ (copy-file "FastTreeMP"
+ (string-append bin "/FastTreeMP"))
+ #t))))))
(home-page "http://www.microbesonline.org/fasttree";)
(synopsis "Infers approximately-maximum-likelihood phylogenetic trees")
(description