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01/05: gnu: python-biopython: Update to 1.68.


From: Ben Woodcroft
Subject: 01/05: gnu: python-biopython: Update to 1.68.
Date: Mon, 19 Sep 2016 07:06:16 +0000 (UTC)

benwoodcroft pushed a commit to branch master
in repository guix.

commit 4ce603058865be5e1da07cc90f4090c94e71dd9f
Author: Ben Woodcroft <address@hidden>
Date:   Mon Sep 19 11:28:50 2016 +1000

    gnu: python-biopython: Update to 1.68.
    
    * gnu/packages/bioinformatics.scm (python-biopython): Update to 1.68.
    [arguments]: New field.
---
 gnu/packages/bioinformatics.scm |   10 ++++++++--
 1 file changed, 8 insertions(+), 2 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 39a420a..69ef785 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -594,15 +594,21 @@ provide a coordinated and extensible framework to do 
computational biology.")
 (define-public python-biopython
   (package
     (name "python-biopython")
-    (version "1.66")
+    (version "1.68")
     (source (origin
               (method url-fetch)
               ;; use PyPi rather than biopython.org to ease updating
               (uri (pypi-uri "biopython" version))
               (sha256
                (base32
-                "1gdv92593klimg22icf5j9by7xiq86jnwzkpz4abaa05ylkdf6hp"))))
+                "07qc7nz0k77y8hf8s18rscvibvm91zw0kkq7ylrhisf8vp8hkp6i"))))
     (build-system python-build-system)
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (add-before 'check 'set-home
+           ;; Some tests require a home directory to be set.
+           (lambda _ (setenv "HOME" "/tmp") #t)))))
     (inputs
      `(("python-numpy" ,python-numpy)))
     (native-inputs



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