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06/17: gnu: Add r-seqminer.
From: |
Ricardo Wurmus |
Subject: |
06/17: gnu: Add r-seqminer. |
Date: |
Tue, 17 Jan 2017 20:47:20 +0000 (UTC) |
rekado pushed a commit to branch master
in repository guix.
commit fb1e528ef1edca46ba4152b88356266944982ebe
Author: Ricardo Wurmus <address@hidden>
Date: Mon Jan 16 11:59:24 2017 +0100
gnu: Add r-seqminer.
* gnu/packages/bioinformatics.scm (r-seqminer): New variable.
---
gnu/packages/bioinformatics.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index cd64d34..28a0da8 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8149,3 +8149,25 @@ high-dimensional data like gene expression/RNA
sequencing/methylation/brain
imaging data that can be used in subsequent analyses to adjust for unknown,
unmodeled, or latent sources of noise.")
(license license:artistic2.0)))
+
+(define-public r-seqminer
+ (package
+ (name "r-seqminer")
+ (version "5.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "seqminer" version))
+ (sha256
+ (base32
+ "0y0gc5lws3hdxasjb84m532ics6imb7qg9sl1zy62h503jh4j9gw"))))
+ (build-system r-build-system)
+ (inputs
+ `(("zlib" ,zlib)))
+ (home-page "http://seqminer.genomic.codes")
+ (synopsis "Read nucleotide sequence data (VCF, BCF, and METAL formats)")
+ (description
+ "This package provides tools to integrate nucleotide sequencing
+data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.")
+ ;; Any version of the GPL is acceptable
+ (license (list license:gpl2+ license:gpl3+))))
- 16/17: gnu: Add r-msnbase., (continued)
- 16/17: gnu: Add r-msnbase., Ricardo Wurmus, 2017/01/17
- 14/17: gnu: Add r-mzid., Ricardo Wurmus, 2017/01/17
- 04/17: gnu: Add ribodiff., Ricardo Wurmus, 2017/01/17
- 01/17: gnu: powertabeditor: Update to 2.0.0-alpha9., Ricardo Wurmus, 2017/01/17
- 03/17: gnu: Add hisat2., Ricardo Wurmus, 2017/01/17
- 07/17: gnu: Add r-raremetals2., Ricardo Wurmus, 2017/01/17
- 15/17: gnu: Add r-pcamethods., Ricardo Wurmus, 2017/01/17
- 12/17: gnu: Add r-affy., Ricardo Wurmus, 2017/01/17
- 11/17: gnu: Add r-affyio., Ricardo Wurmus, 2017/01/17
- 10/17: gnu: Add r-mzr., Ricardo Wurmus, 2017/01/17
- 06/17: gnu: Add r-seqminer.,
Ricardo Wurmus <=
- 09/17: gnu: Add r-protgenerics., Ricardo Wurmus, 2017/01/17
- 17/17: gnu: Add r-msnid., Ricardo Wurmus, 2017/01/17
- 13/17: gnu: Add r-vsn., Ricardo Wurmus, 2017/01/17