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branch staging updated (98bb983 -> e4cddbb)
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From: |
Marius Bakke |
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Subject: |
branch staging updated (98bb983 -> e4cddbb) |
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Date: |
Mon, 22 May 2017 08:57:53 -0400 (EDT) |
mbakke pushed a change to branch staging
in repository guix.
from 98bb983 gnu: ruby: Update to 2.4.0.
adds 4100698 doc: Suggest a network test command that will definitely
be available.
adds e0b2e93 system: grub: Expose GRUB's interactive interface
settings.
adds 6344e95 maint: Really build GuixSD for different systems.
adds 73c791b maint: 'release' now depends on 'dist', not 'distcheck'.
adds 5898968 gnu: Add thermald.
adds d7fa39c services: Add 'thermald-service-type'.
adds 1edbdb0 gnu: par2cmdline: Update to 0.7.0
adds d0abaf8 gnu: Add catdoc.
adds 9eb0f43 gnu: Update kde frameworks to 5.34.0.
adds 9b22c4d gnu: ffmpeg: Update to 3.3.1.
adds 6365733 doc: Document certificate environment variable needed for
R.
adds 9fdda0b gnu: librecad: Use modular Qt.
adds 504c285 gnu: Add dcmtk.
adds 751f858 gnu: Add http-parser.
adds dbe874d gnu: Add ding-libs.
adds 7fe4e55 gnu: Add sssd.
adds cdb2a21 gnu: Add mia.
adds 90e65ab gnu: Add java-mockito-1.
adds 4f4d2e4 gnu: Add java-httpcomponents-httpcore.
adds 3a068b4 gnu: Add java-httpcomponents-httpcore-nio.
adds e1dd78f gnu: Add java-httpcomponents-httpcore-ab.
adds 14a671d gnu: Add java-httpcomponents-httpclient.
adds cbce5de gnu: Add java-httpcomponents-httpmime.
adds 4b34c21 gnu: Add java-commons-net.
adds 808cb58 gnu: Add java-jsch.
adds a624469 gnu: Add java-commons-compress.
adds c48a145 system: grub: Actually default to 'gfxterm' for
displaying the GRUB menu.
adds d44bcd7 gnu: Add java-asm.
adds b13a7cf gnu: Add java-commons-net.
adds 18fe5ef gnu: Add libusb4java.
adds 423b684 gnu: Add java-usb4java.
adds ff3f676 gnu: Add java-rsyntaxtextarea.
adds 77d7b57 gnu: Add java-simple-xml.
adds 6ee6d0b gnu: Add java-osgi-annotation.
adds 37e2e5d gnu: Add java-osgi-core.
adds 674e93a gnu: Add java-eclipse-osgi.
adds 81b55b1 gnu: Add java-eclipse-equinox-common.
adds 8af92c8 gnu: Add java-osgi-service-event.
adds 90368ad gnu: Add java-eclipse-core-jobs.
adds fbaf09e gnu: Add java-eclipse-equinox-registry.
adds 65214c8 gnu: Add java-eclipse-equinox-app.
adds 3f97021 gnu: Add java-eclipse-equinox-preferences.
adds 4ad3d4f gnu: Add java-eclipse-core-contenttype.
adds 6a7f7e4 gnu: Add java-eclipse-core-runtime.
adds b3806a1 gnu: Add java-eclipse-core-filesystem.
adds e96060d gnu: Add java-eclipse-core-expressions.
adds e8d0f7c gnu: Add java-eclipse-core-variables.
adds 7c3d479 gnu: Add java-eclipse-ant-core.
adds 6636f63 gnu: Add java-eclipse-core-resources.
adds 1d4234d gnu: Add java-icu4j.
adds afb5858 gnu: Add java-eclipse-compare-core.
adds 1bb191f gnu: Add java-eclipse-team-core.
adds 3134252 gnu: Add java-eclipse-core-commands.
adds bf96acf gnu: Add java-eclipse-text.
adds c24d11b gnu: Add java-eclipse-jdt-core.
adds 0e660c4 gnu: Add java-log4j-api.
adds 095494e licenses: Add EDL 1.0.
adds a5cdcf6 gnu: Add java-javax-mail.
adds 46bb58b gnu: Add non-mixer.
adds 4511e0d gnu: Add non-timeline.
adds 3ad9039 gnu: antlr2: Simplify build phases.
adds 6d225e8 gnu: antlr2: Minor stylistic changes.
adds f411124 utils: 'compressed-file?' matches ".lzma" files.
adds b7ebcfe doc: Mention 'GUIX_PACKAGE_PATH' in "Defining Packages".
adds c22c9fa services: guix: Authorize the key for bayfront.guixsd.org.
adds 0e2bfa3 doc: Mention 'sync' after 'dd'.
adds a068300 gnu: bind: Rename variable to 'isc-bind'.
adds 4a3495d gnu: khard: Update to 0.11.4.
adds d116695 hydra: Cross-build Guile 2.2.
adds 5a3429b gnu: guile-ssh: Fix bug in 'node-guile-version'.
adds ce92d26 ui: Disable Guile deprecation warnings by default.
adds b09a8da bootloader: Add extlinux support.
adds 9121ce5 bootloader: Adapt vm to new bootloader API.
adds bcaf67c bootloader: Add bootloader name to boot-parameters record.
adds 3042c5d scripts: system: Adapt "reconfigure" to new bootloader
API.
adds 1229d32 scripts: system: Adapt "init" to new bootloader API.
adds 3241f7f scripts: system: Adapt "switch-generation" to new
bootloader API.
adds 5641dff scripts: system: Display bootloader name in
"list-generations".
adds 7ee7ee1 gnu: guix: Update snapshot.
adds 14afc7b gnu: cl-slynk: Clarify the description.
adds 75e8b3a gnu: cl-slynk: Explain some naming choices.
adds bc389c2 build-system/asdf: Rename %install-prefix to
%source-install-prefix.
adds 6c76ce3 build-system/asdf: Make it possible to use "lib" as the
build output.
adds 290bf61 gnu: cl-stumpwm: Build the library in "lib" and the
program in "bin".
adds 3518972 build-system/asdf: Use asdf to determine dependencies.
adds 0e1371b build-system/asdf: Don't rename inputs.
adds 26a16d3 build-system/asdf: Keep ecl's generated archive files.
adds 6de91ba build-system/asdf: Make #:lisp a package argument.
adds b4c9f0c build-system/asdf: Parameterize the lisp type and
implementation globally.
adds 457702b build-system/asdf: Pass the system name as an argument to
the builder.
adds 0186a46 build-system/asdf: Always pre-load the system's
definition file.
adds 40f5617 build-system/asdf: Handle unusually-named systems.
adds ac25925 gnu: Add cl-unicode.
adds b9afcb9 build-system/asdf: Simplify the use of lisp-eval-program.
adds 4209c31 build-system/asdf: Retain references to source files for
binary outputs.
adds f56da60 gnu: sbcl-slynk-boot0: Give the package an appropriate
name.
adds 0383afa build-system/asdf: Handle tests defined in external
systems.
adds 8a3814c doc: Update the documentation for the asdf build systems.
adds e44112e gnu: Rename stringtemplate3 to java-stringtemplate-3.
adds 129d926 gnu: java-stringtemplate-3: Do not hardcode version
string.
adds 2fcda6d gnu: java-stringtemplate-3: Enable tests.
adds b101b4e gnu: java-stringtemplate-3: Use return value in build
phase.
adds 407df78 gnu: stringtemplate4: Inherit from java-stringtemplate-3.
adds f4aa4cf gnu: stringtemplate4: Prettify "generate-grammar" phase.
adds 64b7efc gnu: Rename stringtemplate4 to java-stringtemplate.
adds 1345eeb gnu: Rename stringtemplate4-4.0.6 to
java-stringtemplate-4.0.6.
adds 6db77c7 gnu: java-stringtemplate: Get closer to fixing tests.
adds ca05bc0 gnu: tor: Update to 0.3.0.7.
adds 7c9fcb0 import cran: Fetch DESCRIPTION files from Github mirror.
adds c9ffa91 import cran: Exclude experiment packages in predicate
"bioconductor-package?".
adds daaa270 import cran: Add predicate for Bioconductor experiment
packages.
adds ff8c179 import cran: Export package predicates.
adds a0f4320 import cran: Refactor "needs-zlib?".
adds 17a69cf import cran: Check if pkg-config is needed.
adds 231e48d gnu: emacspeak: Update to 46.0.
adds 711a0dc gnu: glibc/hurd: Use modify-phases syntax.
adds 441e99d gnu: glibc/hurd: Do not apply i686 patch.
adds 16dcac5 gnu: php: Update to 7.1.5.
adds 516bfed profiles: Add elapsed time to manual-database hook to
output message.
adds e0bb0a8 gnu: mes: Update to 0.6.
adds 473f34c gnu: bundler: Update to 1.14.6.
adds 21aecec gnu: ruby-concurrent: Update to 1.0.5.
adds 44a0591 gnu: certbot, python-acme: Update to 0.14.1.
adds 8d17147 gnu: ruby-rack: Update to 2.0.3.
adds e7620b6 gnu: qemu: Fix CVE-2017-7493.
adds 5afc737 gnu: mes: Don't fail when (%current-target-system) is #f.
adds 102a0e8 gnu: emacs-org: Update to 20170515.
adds be62e22 build: Compile stackage only if 'guile-json' is available.
adds 6d35b1c gnu: aspell: 'dict-dir' set to ~/.guix-profile/lib/aspell
or $ASPELL_DICT_DIR.
adds 411ba51 gnu: Add gspell.
adds 872a6fd gnu: tailon: Use absolute paths for commands.
adds 4b236c8 maint: The 'release' target builds a VM image.
adds 42ba7b6 gnu: address@hidden: Update to 4.4.68.
adds d6a0218 gnu: address@hidden: Update to 4.9.28.
adds 05bf7f5 gnu: linux-libre: Update to 4.11.1.
adds ec84c78 gnu: gnubg: Update to 1.05.
adds 32199e9 gnu: fizmo: Update to 0.8.4.
adds 07bf68e services: openssh: Don't depend on networking.
adds c80cd4d install: Enable SSH in installation image.
adds 45433bb gnu: mc: Add unzip to inputs.
adds e28cb7a gnu: gamine: Update to 1.5.
adds 6aa095f gnu: manaplus: Update to 1.7.5.14.
adds b193fb2 gnu: shadow: Update to 4.5.
adds 89c83e8 gnu: npth: Update to 1.4.
adds 0be20a8 gnu: gnupg: Update to 2.1.21.
adds b81b894 gnu: openttd: Update to 1.7.0.
adds 7c5cf7a gnu: qtscript: Fix building on aarch64.
adds 45f5bc0 gnu: qtconnectivity: Fix building on armhf and aarch64.
adds 04f8dec gnu: qtbase: Don't use bundled double-conversion.
adds 4e825e2 gnu: qtbase: Update configure flags.
adds a20e00d gnu: qt: Update to 5.8.0.
adds 41f76ae services: user-homes: Do not create home directories
marked as no-create.
adds 22ef06b union: Gracefully handle dangling symlinks in the input.
adds 8ad37ad bootloader: extlinux: Remove undefined symbols from
export list.
adds 7fb6a9d bootloader: extlinux: Remove syslinux-bootloader.
adds 51ef4af gnu: emacs-async: Update to 1.9.2.
adds 12e72d2 gnu: emacs-helm: Update to 2.7.0.
adds 03cc1cf gnu: Add emacs-helm-swoop.
adds f69c29f gnu: Add emacs-helm-projectile.
adds 2b18ad0 gnu: Add gemma.
adds 27c81fc lint: inputs-should-be-native: Add "cmake".
adds 8cf6a63 gnu: nano: Update to 2.8.3.
adds 4d2e1d1 gnu: mcelog: Update to 150.
adds acf82a1 gnu: btrfs-progs: Update to 4.11.
adds ffa5e0a publish: Fix narinfo rendering for already-compressed
items.
adds 7afc2aa modules: Add more source-less modules.
adds e7fbd49 gnu: guile-ssh: Fix potential double-free/use-after-free
issue.
adds 01cc84d vm: Support arbitrary partition flags.
adds 4d415f0 vm: Support creating FAT partitions.
adds ecf5d53 vm: Add UEFI loader to disk images.
adds 8ea98ee doc: Update for UEFI systems.
adds f6da41b gnu: python-sip: Update to 4.19.2.
adds 5ac3a67 gnu: python-pyqt: Update to 5.8.2.
adds 41fa164 gnu: address@hidden: Update to 4.12.
adds b55dd31 system: Use Guile 2.2 rather than 2.0 in %BASE-PACKAGES.
adds cd6171c gnu: calibre: Update to 2.85.1.
adds 7010d23 gnu: calibre: Import dont-load-icons patch from debian.
adds d94a99e gnu: calibre: Import unbundle feedparser patch from
debian.
adds 29ec085 gnu: calibre: Unbundle python2-markdown.
adds b3399a0 gnu: calibre: Unbundle liberation fonts.
adds eeba7d3 gnu: calibre: Unbundle chardet.
adds 9b7dcc2 gnu: calibre: Add missing dependencies.
adds affaf98 gnu: calibre: Add exhaustive license list.
adds 1326166 gnu: calibre: Don't create uninstaller.
adds 70f8242 gnu: dropbear: Update to 2017.75 [fixes
CVE-2017-{9078,9079}].
adds cc5a76a gnu: Add loksh.
adds d30ce4a gnu: address@hidden: Update to 2.6.10 [security fixes].
adds d6bf931 pack: Use 'guile2.0-json' when building with Guile 2.0.
adds 74460d1 gnu: libssh, guile-ssh: Add a "debug" output.
adds 82ce81b gnu: guix: Add 'guile2.0-guix'.
adds 40fd560 download: Prune the ImageMagick mirror list.
adds b17bd26 gnu: imagemagick: Update to 6.9.8-6.
adds db531f7 gnu: address@hidden: Update to 3.4.0 [security fixes].
adds 12eecbf gnu: address@hidden: Add aarch32-drop.
adds fefd4c1 gnu: pcsc-lite: Update to 1.8.21.
adds 10cb88f gnu: jbig2dec: Fix CVE-2017-{7885,7975,7976}.
adds fda33e4 gnu: ghostscript: Add TODO comment about bundled jbig2dec.
adds 9a1bfe7 vm: Increase default disk size to account for ESP
partition.
adds 9f8d6eb gnu: unionfs-fuse-static: Remove 'unionfsctl' executable.
adds ec8d69e gnu: address@hidden: Update to 4.4.69.
adds 519fd6c gnu: address@hidden: Update to 4.9.29.
adds a08691d gnu: linux-libre: Remove CONFIG_SMC from x86 kernel
configurations.
adds 718448e gnu: linux-libre: Update to 4.11.2.
adds 8b1ff6f gnu: vim-full: Disable failing test.
adds 18f61e0 gnu: vim: Update to 8.0.0600.
adds 31044e6 gnu: nano: Update to 2.8.4.
adds 20d2e1f gnu: fio: Update to 2.20.
adds 1d0aa4d gnu: ccid: Update to 1.4.27.
adds c522f57 gnu: python-future: Update to 0.16.0.
adds abc08cb gnu: python-biom-format: Update to 2.1.6.
adds 88682c9 gnu: fasttree: Update to 2.1.10.
adds ef81341 gnu: diamond: Update to 0.9.0.
adds ba58886 gnu: libaacs: Update to 0.9.0.
adds 3bc45ad gnu: vlc: Update to 2.2.5.1.
adds cfa7473 gnu: x265: Update to 2.4.
adds f1d1ef7 gnu: v4l-utils: Update to 1.12.5.
adds 65efb3c bootloader: extlinux: Add a warning message on top of
generated conf file.
adds b458413 gnu: r-mutationalpatterns: Update to 1.2.1.
adds 3cbfc14 gnu: taxtastic: Update to 0.6.4.
adds 7569613 gnu: roary: Update to 3.8.2.
adds 7429723 gnu: fraggenescan: Update to 1.30.
new e4cddbb Merge branch 'master' into staging
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.dir-locals.el | 1 +
Makefile.am | 37 +-
build-aux/hydra/gnu-system.scm | 2 +-
doc/guix.texi | 177 ++-
gnu.scm | 4 +-
gnu/bootloader.scm | 127 ++
gnu/bootloader/extlinux.scm | 120 ++
gnu/{system => bootloader}/grub.scm | 184 ++-
gnu/build/activation.scm | 9 +-
gnu/build/install.scm | 36 +-
gnu/build/vm.scm | 127 +-
gnu/local.mk | 21 +-
gnu/packages/admin.scm | 60 +-
gnu/packages/aspell.scm | 18 +-
gnu/packages/aux-files/linux-libre/4.11-i686.conf | 3 +-
.../aux-files/linux-libre/4.11-x86_64.conf | 3 +-
gnu/packages/backup.scm | 15 +-
gnu/packages/base.scm | 121 +-
gnu/packages/benchmark.scm | 8 +-
gnu/packages/bioinformatics.scm | 102 +-
gnu/packages/dns.scm | 4 +-
gnu/packages/ebook.scm | 72 +-
gnu/packages/emacs.scm | 113 +-
gnu/packages/engineering.scm | 3 +-
gnu/packages/games.scm | 26 +-
gnu/packages/ghostscript.scm | 1 +
gnu/packages/gnome.scm | 54 +
gnu/packages/gnupg.scm | 12 +-
gnu/packages/icu4c.scm | 29 +
gnu/packages/image-processing.scm | 130 ++
gnu/packages/image.scm | 5 +-
gnu/packages/imagemagick.scm | 4 +-
gnu/packages/java.scm | 1250 ++++++++++++++++++--
gnu/packages/kde-frameworks.scm | 302 ++---
gnu/packages/libusb.scm | 100 +-
gnu/packages/linux.scm | 27 +-
gnu/packages/lisp.scm | 159 ++-
gnu/packages/logging.scm | 15 +
gnu/packages/mail.scm | 4 +-
gnu/packages/mc.scm | 8 +-
gnu/packages/mes.scm | 27 +-
gnu/packages/music.scm | 51 +
gnu/packages/nano.scm | 4 +-
gnu/packages/package-management.scm | 19 +-
gnu/packages/patches/aspell-default-dict-dir.patch | 20 +
.../patches/calibre-dont-load-remote-icons.patch | 45 +
gnu/packages/patches/calibre-drop-unrar.patch | 48 +-
.../patches/calibre-use-packaged-feedparser.patch | 51 +
gnu/packages/patches/gspell-dash-test.patch | 16 +
gnu/packages/patches/guile-ssh-double-free.patch | 37 +
gnu/packages/patches/guile-ssh-rexec-bug.patch | 16 +
gnu/packages/patches/jbig2dec-CVE-2017-7885.patch | 38 +
gnu/packages/patches/jbig2dec-CVE-2017-7975.patch | 40 +
gnu/packages/patches/jbig2dec-CVE-2017-7976.patch | 122 ++
...networkmanager-qt-activeconnection-test-1.patch | 60 -
...networkmanager-qt-activeconnection-test-2.patch | 57 -
gnu/packages/patches/qemu-CVE-2017-7493.patch | 182 +++
gnu/packages/patches/qtscript-disable-tests.patch | 64 +
.../patches/ruby-concurrent-test-arm.patch | 26 +-
.../patches/shadow-4.4-su-snprintf-fix.patch | 31 -
gnu/packages/patches/shadow-CVE-2017-2616.patch | 72 --
gnu/packages/php.scm | 10 +-
gnu/packages/python.scm | 4 +-
gnu/packages/qemu.scm | 1 +
gnu/packages/qt.scm | 162 +--
gnu/packages/ruby.scm | 12 +-
gnu/packages/security-token.scm | 12 +-
gnu/packages/shells.scm | 37 +
gnu/packages/ssh.scm | 8 +-
gnu/packages/sssd.scm | 173 +++
gnu/packages/textutils.scm | 76 +-
gnu/packages/tls.scm | 7 +-
gnu/packages/tor.scm | 6 +-
gnu/packages/video.scm | 27 +-
gnu/packages/vim.scm | 8 +-
gnu/packages/web.scm | 32 +
gnu/packages/xml.scm | 31 +
gnu/services/base.scm | 3 +-
gnu/services/pm.scm | 41 +-
gnu/services/ssh.scm | 2 +-
gnu/system.scm | 28 +-
gnu/system/examples/lightweight-desktop.tmpl | 30 +-
gnu/system/examples/vm-image.tmpl | 53 +
gnu/system/install.scm | 12 +
gnu/system/linux-initrd.scm | 4 +-
gnu/system/vm.scm | 60 +-
gnu/tests.scm | 3 +-
gnu/tests/base.scm | 22 +
gnu/tests/nfs.scm | 3 +-
guix/build-system/asdf.scm | 109 +-
guix/build/asdf-build-system.scm | 182 ++-
guix/build/lisp-utils.scm | 384 +++---
guix/build/union.scm | 43 +-
guix/download.scm | 3 -
guix/import/cran.scm | 101 +-
guix/licenses.scm | 6 +
guix/modules.scm | 11 +-
guix/profiles.scm | 18 +-
guix/scripts/lint.scm | 3 +-
guix/scripts/pack.scm | 11 +-
guix/scripts/publish.scm | 3 +-
guix/scripts/system.scm | 236 ++--
guix/ui.scm | 7 +
guix/utils.scm | 2 +-
tests/profiles.scm | 29 +
tests/publish.scm | 71 +-
106 files changed, 5098 insertions(+), 1507 deletions(-)
create mode 100644 gnu/bootloader.scm
create mode 100644 gnu/bootloader/extlinux.scm
rename gnu/{system => bootloader}/grub.scm (67%)
create mode 100644 gnu/packages/image-processing.scm
create mode 100644 gnu/packages/patches/aspell-default-dict-dir.patch
create mode 100644 gnu/packages/patches/calibre-dont-load-remote-icons.patch
create mode 100644 gnu/packages/patches/calibre-use-packaged-feedparser.patch
create mode 100644 gnu/packages/patches/gspell-dash-test.patch
create mode 100644 gnu/packages/patches/guile-ssh-double-free.patch
create mode 100644 gnu/packages/patches/guile-ssh-rexec-bug.patch
create mode 100644 gnu/packages/patches/jbig2dec-CVE-2017-7885.patch
create mode 100644 gnu/packages/patches/jbig2dec-CVE-2017-7975.patch
create mode 100644 gnu/packages/patches/jbig2dec-CVE-2017-7976.patch
delete mode 100644
gnu/packages/patches/networkmanager-qt-activeconnection-test-1.patch
delete mode 100644
gnu/packages/patches/networkmanager-qt-activeconnection-test-2.patch
create mode 100644 gnu/packages/patches/qemu-CVE-2017-7493.patch
create mode 100644 gnu/packages/patches/qtscript-disable-tests.patch
delete mode 100644 gnu/packages/patches/shadow-4.4-su-snprintf-fix.patch
delete mode 100644 gnu/packages/patches/shadow-CVE-2017-2616.patch
create mode 100644 gnu/packages/sssd.scm
create mode 100644 gnu/system/examples/vm-image.tmpl
- branch staging updated (98bb983 -> e4cddbb),
Marius Bakke <=