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06/06: gnu: pigx-chipseq: Update to 0.0.8.
From: |
Ricardo Wurmus |
Subject: |
06/06: gnu: pigx-chipseq: Update to 0.0.8. |
Date: |
Mon, 19 Mar 2018 06:08:14 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 32b7ccf9b4c490613395d5f8ad06334c797e47e0
Author: Ricardo Wurmus <address@hidden>
Date: Mon Mar 19 10:45:40 2018 +0100
gnu: pigx-chipseq: Update to 0.0.8.
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.8.
[inputs]: Add python-magic, python-xlrd, and trim-galore.
[arguments]: Disable tests.
---
gnu/packages/bioinformatics.scm | 10 +++++++---
1 file changed, 7 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 91f5d61..80f1437 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -12737,7 +12737,7 @@ expression report comparing samples in an easily
configurable manner.")
(define-public pigx-chipseq
(package
(name "pigx-chipseq")
- (version "0.0.2")
+ (version "0.0.8")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/BIMSBbioinfo/pigx_chipseq/"
@@ -12745,10 +12745,11 @@ expression report comparing samples in an easily
configurable manner.")
"/pigx_chipseq-" version ".tar.gz"))
(sha256
(base32
- "1jliwhifnjgl9x0z730bzpxswi2s84fyg5y8cagbyzpw509452f5"))))
+ "1plw0bz0b7flj0g9irbn8n520005lmajkiq5flpizzapsl0a0r9g"))))
(build-system gnu-build-system)
(arguments
- `(#:phases
+ `(#:tests? #f ; parts of the tests rely on access to the network
+ #:phases
(modify-phases %standard-phases
(add-after 'install 'wrap-executable
;; Make sure the executable finds all R modules.
@@ -12773,8 +12774,11 @@ expression report comparing samples in an easily
configurable manner.")
("r-ggplot2" ,r-ggplot2)
("r-plotly" ,r-plotly)
("python-wrapper" ,python-wrapper)
+ ("python-magic" ,python-magic)
("python-pyyaml" ,python-pyyaml)
+ ("python-xlrd" ,python-xlrd)
("snakemake" ,snakemake)
+ ("trim-galore" ,trim-galore)
("macs" ,macs)
("multiqc" ,multiqc)
("perl" ,perl)
- branch master updated (be95bcf -> 32b7ccf), Ricardo Wurmus, 2018/03/19
- 01/06: gnu: Add ghc-pandoc-citeproc-with-pandoc-1., Ricardo Wurmus, 2018/03/19
- 06/06: gnu: pigx-chipseq: Update to 0.0.8.,
Ricardo Wurmus <=
- 05/06: gnu: pigx-scrnaseq: Use pandoc-1., Ricardo Wurmus, 2018/03/19
- 02/06: gnu: pigx-rnaseq: Use pandoc-1., Ricardo Wurmus, 2018/03/19
- 03/06: gnu: pigx-chipseq: Use pandoc-1., Ricardo Wurmus, 2018/03/19
- 04/06: gnu: pigx-bsseq: Use pandoc-1., Ricardo Wurmus, 2018/03/19