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02/02: gnu: pigx-rnaseq: Update to 0.0.4.
From: |
Ricardo Wurmus |
Subject: |
02/02: gnu: pigx-rnaseq: Update to 0.0.4. |
Date: |
Tue, 3 Jul 2018 10:20:38 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit c7d5cd6ca56241c5a17c2c917f6e03a26a03ee15
Author: Ricardo Wurmus <address@hidden>
Date: Tue Jul 3 16:19:24 2018 +0200
gnu: pigx-rnaseq: Update to 0.0.4.
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.4.
[arguments]: Remove "wrap-executable" phase.
---
gnu/packages/bioinformatics.scm | 12 ++----------
1 file changed, 2 insertions(+), 10 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index c0ee641..e8408b9 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -12831,7 +12831,7 @@ once. This package provides tools to perform Drop-seq
analyses.")
(define-public pigx-rnaseq
(package
(name "pigx-rnaseq")
- (version "0.0.3")
+ (version "0.0.4")
(source (origin
(method url-fetch)
(uri (string-append
"https://github.com/BIMSBbioinfo/pigx_rnaseq/"
@@ -12839,7 +12839,7 @@ once. This package provides tools to perform Drop-seq
analyses.")
"/pigx_rnaseq-" version ".tar.gz"))
(sha256
(base32
- "0pz080k4ajlc4rlznkn3najy2a6874gb56rf9g4ag9wqz31q174j"))))
+ "16gla23rmziimqan7w494q0nr7vfbp42zzkrl9fracmr4k7b1kzr"))))
(build-system gnu-build-system)
(arguments
`(#:parallel-tests? #f ; not supported
@@ -12851,14 +12851,6 @@ once. This package provides tools to perform Drop-seq
analyses.")
(substitute* "Makefile.in"
(("(^ tests/test_trim_galore/test.sh).*" _ m) m)
(("^ test.sh") ""))
- #t))
- (add-after 'install 'wrap-executable
- ;; Make sure the executable finds all R modules.
- (lambda* (#:key inputs outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out")))
- (wrap-program (string-append out "/bin/pigx-rnaseq")
- `("R_LIBS_SITE" ":" = (,(getenv "R_LIBS_SITE")))
- `("PYTHONPATH" ":" = (,(getenv "PYTHONPATH")))))
#t)))))
(inputs
`(("gzip" ,gzip)