[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
branch core-updates updated (985d542 -> ffec356)
|
From: |
Marius Bakke |
|
Subject: |
branch core-updates updated (985d542 -> ffec356) |
|
Date: |
Tue, 25 Sep 2018 19:35:07 -0400 (EDT) |
mbakke pushed a change to branch core-updates
in repository guix.
from 985d542 gnu: gstreamer: Update to 1.14.3.
adds 26358ac gnu: Add r-parmigene.
adds 391fc11 gnu: python2-scikit-learn: Fix check phase.
adds e30397d gnu: ghc-xml-conduit: Update to 1.8.0.1.
adds a235ea4 gnu: ghc-pandoc-citeproc: Update to 0.14.3.1.
adds 89ee8a6 gnu: rsem: Update to 1.3.1.
adds f5c10a9 gnu: gprolog: Update to 1.4.5.
adds ea23646 gnu: qbittorrent: Update to 4.1.3.
adds c6ede26 gnu: address@hidden: Update to 4.4.157.
adds 41d6afb gnu: address@hidden: Update to 4.9.128.
adds c57a2a1 gnu: address@hidden: Update to 4.14.71.
adds 83e8b1d gnu: linux-libre: Update to 4.18.9.
adds 1bfaae2 gnu: address@hidden: Fix tests.
adds e0b07cc gnu: rust: Work around mtime bug in rust build helpers.
adds eeecbe0 gnu: perl-dbd-mysql: Update to 4.048.
adds 4aa64e3 gnu: ubuntu-keyring: Update to 2018.09.18.1.
adds 1779aaa Add 'GNU Guix' comment to all (gnu packages) headers.
adds 29ddbc5 gnu: python-pydot: Update to 1.2.4.
adds 3752b68 gnu: openscenegraph: Update to 3.6.3.
adds 1df40d3 gnu: emacs-orgalist: Update to 1.9.
adds 174988f gnu: perl-xml-compile: Update to 1.60.
adds 6f05556 gnu: s6: Update to 2.7.2.1.
adds e360586 gnu: python-hdf4: Use INVOKE.
adds a1d6610 gnu: python-rencode: Update to 1.0.5.
adds 101ad24 gnu: python-paramiko: Use HTTPS home page.
adds 6569549 gnu: python-paramiko: Update to 2.4.2 [security fixes].
adds c5327ef gnu: libvpx: Add upstream security fix.
adds e67ad55 gnu: icecat: Update to 60.2.0-gnu1 (pre-release).
adds 2aa137e gnu: crossguid: Use INVOKE.
adds 93ab9a5 gnu: kodi: Use INVOKE.
adds eacb5dc gnu: emacs-mu4e-conversation: Fix typo in description.
adds 41e551b gnu: python-pyparsing: Update home page.
adds 118a084 gnu: libfilezilla: Update to 0.13.2.
adds 10e066f gnu: rust: Remove unused "localstatedir" setting.
adds b0d1e60 gnu: hdf5: Allow for absence of utility script.
adds 45201bf gnu: hdf5-parallel-openmpi: Really enable parallel build.
adds 7e27393 gnu: Add r-pore.
adds 9daf046 inferior: Add 'inferior-package-derivation'.
adds e1a4ffd inferior: Add 'lookup-inferior-packages'.
adds 6030396 inferior: Add 'inferior-package-inputs' & co.
adds eee8b30 inferior: Add 'inferior-package-search-paths' & co.
adds 2e6d64e inferior: Add 'inferior-package->manifest-entry'.
adds 811b21f profiles: 'packages->manifest' now accepts inferior
packages.
adds c37f38b channels: Add 'channel-instances->derivation'.
adds 2dad031 inferior: Add 'inferior-for-channels'.
adds 92a9f14 doc: Add section about inferiors.
adds ec944a1 gnu: rust: Remove unused "ar" setting.
adds 199d72e gnu: python-pyparsing: Update to 2.2.1.
adds 9a32bdf gnu: wxwidgets: Update to 3.0.4.
adds 10fadd1 gnu: filezilla: Update to 3.37.1.
adds 43726c5 gnu: emacs-password-store: Update to 1.7.3.
adds 1302837 gnu: workrave: Update to 1.10.21.
adds a255142 gnu: emacs-org: Update to 9.1.14.
adds 78b7b9d gnu: snap: Update to 4.2.1.4.
adds 05fb1e0 gnu: hmmer: Update to 3.2.1.
adds 91294b5 Revert 'gnu: rust: Remove unused "ar" setting.'.
adds ae71cd8 gnu: icecat: Add fixes from upstream mozilla-esr60
[security fixes].
adds 21280a8 gnu: Add Go 1.11.
adds 844cc6f gnu: webkitgtk: Add version 2.22.2.
adds 480d39a gnu: epiphany: Use webkitgtk-2.22.
adds 84b3343 gnu: eolie: Use webkitgtk-2.22.
adds 94676de gnu: xpra: Update to 2.3.4.
adds e10bf49 gnu: Add emacs-synosaurus.
adds 88600ac system: Mention '--skip-checks' in initrd diagnostics.
adds c122a2e serialization: Remove redundancy in 'write-file'.
adds a387b0b store-copy: Display a progress bar when copying store
items.
adds f0addd6 database: 'register-items' shows a progress bar.
adds bb3b6cc database: Register each store item only once.
adds b5460d9 vm: Disable deduplication for 'guix system vm-image'.
adds fce2254 vm: Use "cache=loose" for all 9p mounts.
adds 8fa361c gnu: fping: Update to 4.1.
adds 25706b8 gnu: fping: Use HTTPS home page.
adds 0604d3c gnu: nano: Update to 3.1.
adds 899e197 gnu: python-gitdb: Update to 2.0.4.
adds 2f7ad2a gnu: workrave: Use Guix's built-in bootstrap phase.
adds 2c36baa gnu: parallel: Update to 20180922.
adds c30fd00 gnu: virtualgl: Update to 2.6.
adds a42b684 gnu: libiptcdata: Update to 1.0.5.
adds 3715e79 gnu: python-marshmallow: Update to 3.0.0b14.
adds 68cbec0 gnu: python-decorator: Update to 4.3.0.
adds dd29bd4 gnu: python-networkx: Update to 2.2.
adds cd8aa06 gnu: python-networkx: Use HTTPS home page.
adds 5c8031f gnu: Prefix all Emacs packages with "emacs-".
adds a434730 gnu: Add r-xbioc.
adds 28829c0 gnu: Add r-cssam.
adds e727024 gnu: Add r-bseqsc.
adds 9428235 gnu: m17n-db: Update to 1.8.0.
adds 53c64d7 gnu: m17n-lib: Update to 1.8.0.
adds d08b325 gnu: Add python-grequests.
adds 0750f34 gnu: Add python-hawkauthlib.
adds 084e14c gnu: Add python-pybrowserid.
adds f45bb3c gnu: Add python-pyfxa.
adds 0001478 gnu: eolie: Update to 0.9.37.
adds 8ae540a gnu: ocaml-ssl: Don't use unstable tarball.
adds c60d5a2 gnu: libmesode: Don't use unstable tarball.
adds b44a18c gnu: libmesode: Update to 0.9.2.
adds 25ab91c gnu: gloox: Update to 1.0.21.
adds 4cb4af7 gnu: lxterminal: Update to 0.3.2.
adds e6dcf9c gnu: rename: Update to 1.00.
adds a68b451 gnu: Add gandi.cli.
adds 116af86 gnu: octave: Add a search path for CURLOPT_CAPATH.
adds f1ea075 gnu: qjackctl: Update to 0.5.4.
adds 932839f gnu: ibus: Update to 1.5.19.
adds 7937480 gnu: python-flask-login: Don't use unstable tarball.
adds bbc6902 gnu: Add python-semantic-version.
adds d6ab1d0 gnu: python-flask-login: Update to 0.4.1.
adds 238d950 gnu: python-nose-timer: Update to 0.7.3.
adds 6d7ca74 gnu: 389-ds-base: Fix build.
adds 06e6b17 gnu: python-pexpect: Use INVOKE.
adds 38e1095 gnu: python-wsgiproxy2: Update to 0.4.5.
adds 35f9037 gnu: Add guile-next.
adds a7a8877 gnu: diffoscope: Update to 102.
adds 2e3a625 gnupg: Change default keyserver.
adds cfe1968 progress: 'progress-reporter-report!' takes any number of
arguments.
adds f85dbc4 substitute: Progress port really closes underlying port.
adds 88268a3 pull: Try harder to use the host's X.509 certificates.
adds 280fc83 git-download: Don't assume the working directory is the
parent of ".git".
adds 52b8785 gnu: enchant: Update home page.
adds 18ef85b gnu: enchant: Don't build libenchant.a.
adds 9a59b29 gnu: enchant: Propagate Glib.
adds c1d59b3 gnu: enchant: Update to 2.2.3.
adds 9b1bb75 gnu: gspell: Update to 1.8.1.
adds a0c9ba1 gnu: webkitgtk: Remove obsolete phase.
adds 020c4ef gnu: node: Delete expired tests.
adds e789b85 gnu: Add Node LTS.
adds 5f33e90 gnu: varnish: Use absolute file name of "rm".
adds 3b97a17 services: Add Varnish service.
new 6a0427a Merge branch 'master' into core-updates
new ffec356 gnu: node: Build against address@hidden
The 2 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
doc/guix.texi | 211 +++++++
gnu/local.mk | 6 +-
gnu/packages/admin.scm | 20 +-
gnu/packages/audio.scm | 4 +-
gnu/packages/bioinformatics.scm | 248 ++++++--
gnu/packages/bittorrent.scm | 6 +-
gnu/packages/check.scm | 4 +-
gnu/packages/cran.scm | 20 +
gnu/packages/databases.scm | 6 +-
gnu/packages/debian.scm | 7 +-
gnu/packages/education.scm | 4 +-
gnu/packages/emacs.scm | 184 ++++--
gnu/packages/enchant.scm | 58 +-
gnu/packages/fcitx.scm | 2 +-
gnu/packages/ftp.scm | 16 +-
gnu/packages/gl.scm | 13 +-
gnu/packages/gnome.scm | 60 +-
gnu/packages/gnuzilla.scm | 166 ++---
gnu/packages/golang.scm | 119 ++++
gnu/packages/gprolog.scm | 19 +-
gnu/packages/graphics.scm | 8 +-
gnu/packages/graphviz.scm | 9 +-
gnu/packages/gtk.scm | 5 +-
gnu/packages/guile.scm | 40 +-
gnu/packages/haskell.scm | 9 +-
gnu/packages/ibus.scm | 37 +-
gnu/packages/image.scm | 12 +-
gnu/packages/kodi.scm | 27 +-
gnu/packages/libevent.scm | 13 +
gnu/packages/linux.scm | 16 +-
gnu/packages/lxde.scm | 4 +-
gnu/packages/machine-learning.scm | 19 +-
gnu/packages/mate.scm | 2 +-
gnu/packages/maths.scm | 21 +-
gnu/packages/messaging.scm | 17 +-
gnu/packages/nano.scm | 4 +-
gnu/packages/networking.scm | 56 +-
gnu/packages/node.scm | 36 +-
gnu/packages/ocaml.scm | 12 +-
gnu/packages/openldap.scm | 1 +
gnu/packages/package-management.scm | 4 +-
gnu/packages/parallel.scm | 6 +-
.../patches/hmmer-remove-cpu-specificity.patch | 22 -
gnu/packages/patches/icecat-CVE-2018-12383.patch | 103 ++++
.../icecat-CVE-2018-5157-and-CVE-2018-5158.patch | 441 -------------
.../patches/icecat-avoid-bundled-libraries.patch | 20 +-
gnu/packages/patches/icecat-bug-1413868-pt1.patch | 663 --------------------
.../libvpx-use-after-free-in-postproc.patch | 34 +
gnu/packages/patches/rsem-makefile.patch | 682 ---------------------
gnu/packages/python-crypto.scm | 6 +-
gnu/packages/python-web.scm | 140 ++++-
gnu/packages/python.scm | 75 ++-
gnu/packages/rust.scm | 57 +-
gnu/packages/skarnet.scm | 4 +-
gnu/packages/syndication.scm | 3 +
gnu/packages/version-control.scm | 6 +-
gnu/packages/video.scm | 3 +-
gnu/packages/web.scm | 4 +-
gnu/packages/webkit.scm | 49 +-
gnu/packages/wxwidgets.scm | 4 +-
gnu/packages/xml.scm | 11 +-
gnu/packages/xorg.scm | 4 +-
gnu/services/web.scm | 96 ++-
gnu/system/mapped-devices.scm | 5 +-
gnu/system/vm.scm | 20 +-
gnu/tests/web.scm | 41 ++
guix/build/store-copy.scm | 23 +-
guix/channels.scm | 16 +-
guix/git-download.scm | 15 +-
guix/gnupg.scm | 2 +-
guix/inferior.scm | 366 ++++++++++-
guix/profiles.scm | 27 +-
guix/progress.scm | 4 +-
guix/scripts/pull.scm | 20 +-
guix/scripts/substitute.scm | 4 +-
guix/serialization.scm | 3 +-
guix/store/database.scm | 44 +-
tests/guix-package.sh | 15 +
tests/inferior.scm | 123 +++-
79 files changed, 2304 insertions(+), 2382 deletions(-)
delete mode 100644 gnu/packages/patches/hmmer-remove-cpu-specificity.patch
create mode 100644 gnu/packages/patches/icecat-CVE-2018-12383.patch
delete mode 100644
gnu/packages/patches/icecat-CVE-2018-5157-and-CVE-2018-5158.patch
delete mode 100644 gnu/packages/patches/icecat-bug-1413868-pt1.patch
create mode 100644 gnu/packages/patches/libvpx-use-after-free-in-postproc.patch
delete mode 100644 gnu/packages/patches/rsem-makefile.patch
- branch core-updates updated (985d542 -> ffec356),
Marius Bakke <=