>From 47519e0145298c00e4bfa672d92b9f700d12f5ad Mon Sep 17 00:00:00 2001 From: Ben Woodcroft Date: Sat, 25 Jul 2015 22:54:19 +1000 Subject: [PATCH] gnu: bedtools: Update to 2.24.0. * gnu/packages/bioinformatics.scm (bedtools): Update to 2.24.0. --- gnu/packages/bioinformatics.scm | 7 +++++-- 1 file changed, 5 insertions(+), 2 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 78cd3ce..738d559 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -148,7 +148,7 @@ computational cluster.") (define-public bedtools (package (name "bedtools") - (version "2.22.0") + (version "2.24.0") (source (origin (method url-fetch) (uri (string-append "https://github.com/arq5x/bedtools2/archive/v" @@ -156,7 +156,10 @@ computational cluster.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "16aq0w3dmbd0853j32xk9jin4vb6v6fgakfyvrsmsjizzbn3fpfl")))) + "0lnxrjvs3nnmb4bmskag1wg3h2hd80przz5q3xd0bvs7vyxrvpbl")) + ;; Fixed in upstream, see + ;; https://github.com/arq5x/bedtools2/issues/271 + (patches (list (search-patch "bedtools-32bit-compilation.patch"))))) (build-system gnu-build-system) (native-inputs `(("python" ,python-2))) (inputs `(("samtools" ,samtools) -- 2.4.3