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Re: [PATCH] gnu: Add mash.
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From: |
Leo Famulari |
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Subject: |
Re: [PATCH] gnu: Add mash. |
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Date: |
Tue, 6 Sep 2016 17:01:27 -0400 |
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User-agent: |
Mutt/1.7.0 (2016-08-17) |
On Thu, Sep 01, 2016 at 11:00:39AM +0100, Marius Bakke wrote:
> I had these in inputs initially and was surprised to see no references.
> Both seems to be compiled into the final program[0]: when running "mash
> info" on an invalid file (the provided data/refseq.msh), a generic
> capnproto exception is thrown (src/capnp/serialize.c++:159).
I wonder, does using native-inputs work when building mash for another
architecture?
> That raises another question: should the htslib and capnproto licenses
> be listed too, since they are part of the binary output?
Good question, I'm not sure. I'd guess "yes", along with a code comment
explaining what's going on.
>
> I'm not a bioinformatician (just a mere sysadmin for such), but have
> been going through the tutorial and things appear to work fine.
Ah, bioinformatics software... all bets are off ;)