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[PATCH 17/25] gnu: Add r-annotationforge.
From: |
Ricardo Wurmus |
Subject: |
[PATCH 17/25] gnu: Add r-annotationforge. |
Date: |
Wed, 21 Sep 2016 22:45:33 +0200 |
* gnu/packages/bioinformatics.scm (r-annotationforge): New variable.
---
gnu/packages/bioinformatics.scm | 29 +++++++++++++++++++++++++++++
1 file changed, 29 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 2df63ee..a5aadd0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5163,6 +5163,35 @@ differential expression based on a model using the
negative binomial
distribution.")
(license license:lgpl3+)))
+(define-public r-annotationforge
+ (package
+ (name "r-annotationforge")
+ (version "1.14.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "AnnotationForge" version))
+ (sha256
+ (base32
+ "1vkdd1qdv5g680ipw4vwjvn52xn66xpg6ngmwyknz77ckxnnpf4q"))))
+ (properties
+ `((upstream-name . "AnnotationForge")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotationdbi" ,r-annotationdbi)
+ ("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-dbi" ,r-dbi)
+ ("r-rsqlite" ,r-rsqlite)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-xml" ,r-xml)))
+ (home-page "http://bioconductor.org/packages/AnnotationForge")
+ (synopsis "Code for building annotation database packages")
+ (description
+ "This package provides code for generating Annotation packages and their
+databases. Packages produced are intended to be used with AnnotationDbi.")
+ (license license:artistic2.0)))
+
(define-public vsearch
(package
(name "vsearch")
--
2.9.3
- [PATCH 07/25] gnu: Add r-genefilter., (continued)
- [PATCH 07/25] gnu: Add r-genefilter., Ricardo Wurmus, 2016/09/21
- [PATCH 08/25] gnu: Add r-deseq2., Ricardo Wurmus, 2016/09/21
- [PATCH 09/25] gnu: Add r-matrix., Ricardo Wurmus, 2016/09/21
- [PATCH 10/25] gnu: Add r-pheatmap., Ricardo Wurmus, 2016/09/21
- [PATCH 11/25] gnu: Add r-sendmailr., Ricardo Wurmus, 2016/09/21
- [PATCH 12/25] gnu: Add r-backports., Ricardo Wurmus, 2016/09/21
- [PATCH 14/25] gnu: Add r-bbmisc., Ricardo Wurmus, 2016/09/21
- [PATCH 13/25] gnu: Add r-checkmate., Ricardo Wurmus, 2016/09/21
- [PATCH 15/25] gnu: Add r-fail., Ricardo Wurmus, 2016/09/21
- [PATCH 16/25] gnu: Add r-batchjobs., Ricardo Wurmus, 2016/09/21
- [PATCH 17/25] gnu: Add r-annotationforge.,
Ricardo Wurmus <=
- [PATCH 18/25] gnu: Add r-rbgl., Ricardo Wurmus, 2016/09/21
- [PATCH 19/25] gnu: Add r-gseabase., Ricardo Wurmus, 2016/09/21
- [PATCH 20/25] gnu: Add r-category., Ricardo Wurmus, 2016/09/21
- [PATCH 21/25] gnu: Add r-gostats., Ricardo Wurmus, 2016/09/21
- [PATCH 22/25] gnu: Add r-shortread., Ricardo Wurmus, 2016/09/21
- [PATCH 23/25] gnu: Add r-systempiper., Ricardo Wurmus, 2016/09/21
- [PATCH 24/25] gnu: Add r-grohmm., Ricardo Wurmus, 2016/09/21
- [PATCH 25/25] gnu: Add r-txdb-hsapiens-ucsc-hg19-knowngene., Ricardo Wurmus, 2016/09/21
- Re: [PATCH 01/25] gnu: Add r-hwriter., Ludovic Courtès, 2016/09/24