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Re: [PATCH 3/4] gnu: Add barrnap.
From: |
Ricardo Wurmus |
Subject: |
Re: [PATCH 3/4] gnu: Add barrnap. |
Date: |
Sun, 04 Dec 2016 16:51:26 +0100 |
User-agent: |
mu4e 0.9.16; emacs 25.1.1 |
Marius Bakke <address@hidden> writes:
> Ben Woodcroft <address@hidden> writes:
>
>> * gnu/packages/bioinformatics.scm (barrnap): New variable.
[…]
>> +16S) and eukaryotes (5S, 5.8S, 28S, 18S). It takes FASTA DNA sequence as
>> input,
>> +and write GFF3 as output. It uses the NHMMER tool that comes with HMMER for
>> +HMM searching in RNA:DNA style.")
>> + (license (list license:gpl3
>> + ;; The Rfam HMMs are under cc0, and the SILVA-derived
>> HMMs are
>> + ;; academic-only.
>
> I don't think we can package the SILVA files. They are very much
> non-free according to the license text:
You’re right! Ben, could you delete them from the package in a snippet?
--
Ricardo
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