[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
[PATCH 06/16] gnu: Add r-raremetals2.
From: |
Ricardo Wurmus |
Subject: |
[PATCH 06/16] gnu: Add r-raremetals2. |
Date: |
Tue, 17 Jan 2017 15:11:31 +0100 |
* gnu/packages/bioinformatics.scm (r-raremetals2): New variable.
---
gnu/packages/bioinformatics.scm | 31 +++++++++++++++++++++++++++++++
1 file changed, 31 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 28a0da80e..743e8fdce 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8171,3 +8171,34 @@ unmodeled, or latent sources of noise.")
data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.")
;; Any version of the GPL is acceptable
(license (list license:gpl2+ license:gpl3+))))
+
+(define-public r-raremetals2
+ (package
+ (name "r-raremetals2")
+ (version "0.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "http://genome.sph.umich.edu/w/images/"
+ "b/b7/RareMETALS2_" version ".tar.gz"))
+ (sha256
+ (base32
+ "0z5ljcgvnm06ja9lm85a3cniq7slxcy37aqqkxrdidr79an5fs4s"))))
+ (properties `((upstream-name . "RareMETALS2")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-seqminer" ,r-seqminer)
+ ("r-mvtnorm" ,r-mvtnorm)
+ ("r-compquadform" ,r-compquadform)
+ ("r-getopt" ,r-getopt)))
+ (home-page "http://genome.sph.umich.edu/wiki/RareMETALS2")
+ (synopsis "Analyze gene-level association tests for binary trait")
+ (description
+ "The R package rareMETALS2 is an extension of the R package rareMETALS.
+It was designed to meta-analyze gene-level association tests for binary trait.
+While rareMETALS offers a near-complete solution for meta-analysis of
+gene-level tests for quantitative trait, it does not offer the optimal
+solution for binary trait. The package rareMETALS2 offers improved features
+for analyzing gene-level association tests in meta-analyses for binary
+trait.")
+ (license license:gpl3)))
--
2.11.0
- Re: [PATCH 01/16] gnu: Add python-argparse., (continued)
Re: [PATCH 01/16] gnu: Add python-argparse., Alex Kost, 2017/01/17
[PATCH 03/16] gnu: Add ribodiff., Ricardo Wurmus, 2017/01/17
[PATCH 02/16] gnu: Add hisat2., Ricardo Wurmus, 2017/01/17
[PATCH 04/16] gnu: Add r-compquadform., Ricardo Wurmus, 2017/01/17
[PATCH 05/16] gnu: Add r-seqminer., Ricardo Wurmus, 2017/01/17
[PATCH 07/16] gnu: Add r-maldiquant., Ricardo Wurmus, 2017/01/17
[PATCH 06/16] gnu: Add r-raremetals2.,
Ricardo Wurmus <=
[PATCH 08/16] gnu: Add r-protgenerics., Ricardo Wurmus, 2017/01/17
[PATCH 09/16] gnu: Add r-mzr., Ricardo Wurmus, 2017/01/17
[PATCH 10/16] gnu: Add r-affyio., Ricardo Wurmus, 2017/01/17
[PATCH 11/16] gnu: Add r-affy., Ricardo Wurmus, 2017/01/17
[PATCH 13/16] gnu: Add r-mzid., Ricardo Wurmus, 2017/01/17
[PATCH 14/16] gnu: Add r-pcamethods., Ricardo Wurmus, 2017/01/17
[PATCH 12/16] gnu: Add r-vsn., Ricardo Wurmus, 2017/01/17