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[PATCH] More reproducibility fixes for R.


From: Ricardo Wurmus
Subject: [PATCH] More reproducibility fixes for R.
Date: Thu, 9 Feb 2017 15:47:21 +0100
User-agent: mu4e 0.9.16; emacs 25.1.1

Hi Guix,

attached are more reproducibility fixes for R.  Unfortunately, it seems
that files of type “rdb”, “rdx”, and “rds” are still not reproducible.
This leaves us with the following files in R that are currently not
reproducible:

/lib/R/library/boot/help/boot.rdb
/lib/R/library/boot/help/boot.rdx
/lib/R/library/boot/help/paths.rds

/lib/R/library/class/help/class.rdb
/lib/R/library/class/help/class.rdx
/lib/R/library/class/help/paths.rds

/lib/R/library/cluster/help/cluster.rdb
/lib/R/library/cluster/help/cluster.rdx
/lib/R/library/cluster/help/paths.rds

/lib/R/library/codetools/help/codetools.rdb
/lib/R/library/codetools/help/codetools.rdx
/lib/R/library/codetools/help/paths.rds

/lib/R/library/foreign/help/foreign.rdb
/lib/R/library/foreign/help/foreign.rdx
/lib/R/library/foreign/help/paths.rds

/lib/R/library/KernSmooth/help/KernSmooth.rdb
/lib/R/library/KernSmooth/help/KernSmooth.rdx
/lib/R/library/KernSmooth/help/paths.rds

/lib/R/library/lattice/help/lattice.rdb
/lib/R/library/lattice/help/lattice.rdx
/lib/R/library/lattice/help/paths.rds

/lib/R/library/MASS/help/MASS.rdb
/lib/R/library/MASS/help/MASS.rdx
/lib/R/library/MASS/help/paths.rds

/lib/R/library/Matrix/help/Matrix.rdb
/lib/R/library/Matrix/help/Matrix.rdx
/lib/R/library/Matrix/help/paths.rds

/lib/R/library/methods/R/methods.rdb
/lib/R/library/methods/R/methods.rdx

/lib/R/library/mgcv/help/mgcv.rdb
/lib/R/library/mgcv/help/mgcv.rdx
/lib/R/library/mgcv/help/paths.rds

/lib/R/library/nlme/help/nlme.rdb
/lib/R/library/nlme/help/nlme.rdx
/lib/R/library/nlme/help/paths.rds

/lib/R/library/nnet/help/nnet.rdb
/lib/R/library/nnet/help/nnet.rdx
/lib/R/library/nnet/help/paths.rds

/lib/R/library/rpart/help/paths.rds
/lib/R/library/rpart/help/rpart.rdb
/lib/R/library/rpart/help/rpart.rdx

/lib/R/library/spatial/help/paths.rds
/lib/R/library/spatial/help/spatial.rdb
/lib/R/library/spatial/help/spatial.rdx

/lib/R/library/survival/help/paths.rds
/lib/R/library/survival/help/survival.rdb
/lib/R/library/survival/help/survival.rdx

/lib/R/library/tools/help/tools.rdb
/lib/R/library/tools/help/tools.rdx

I’ll try to figure out if there’s something we can do to make them
reproducible (there’s a Debian bug report with relevant information).  I
had originally assumed that 3.3.2 already included fixes for this.

Here’s the patch:

Attachment: patch
Description: Binary data


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