Re: 01/01: gnu: bedtools: Update to 2.27.0.

[Mark H Weaver]

Hi Ricardo,

Ricardo Wurmus <address@hidden> writes:

> Mark H Weaver <address@hidden> writes:
>
>> address@hidden (Ricardo Wurmus) writes:
>>
>>> rekado pushed a commit to branch master
>>> in repository guix.
>>>
>>> commit 0d9824cc127f045d32c22d0c75df46d97cb61624
>>> Author: Ricardo Wurmus <address@hidden>
>>> Date:   Wed Dec 6 19:12:16 2017 +0100
>>>
>>>     gnu: bedtools: Update to 2.27.0.
>>>
>>>     * gnu/packages/bioinformatics.scm (bedtools): Update to 2.27.0.
>>>     [arguments]: Remove custom "install" phase; specify prefix.
>>
>> The standard 'install' phase seems to have failed on Hydra:
>>
>>   https://hydra.gnu.org/build/2389354
>>
>> --8<---------------cut here---------------start------------->8---
>> starting phase `install'
>> make: *** No rule to make target 'install'.  Stop.
>> phase `install' failed after 0.0 seconds
>> builder for 
>> `/gnu/store/fq59s5x7kxn8sq9wl62334bacpjgj1b3-bedtools-2.18.0.drv' failed 
>> with exit code 1
>> @ build-failed
>> /gnu/store/fq59s5x7kxn8sq9wl62334bacpjgj1b3-bedtools-2.18.0.drv - 1
>> builder for
>> `/gnu/store/fq59s5x7kxn8sq9wl62334bacpjgj1b3-bedtools-2.18.0.drv'
>> failed with exit code 1
>> --8<---------------cut here---------------end--------------->8---
>
> “builder for … 2.18.0”?  This should be version 2.27.0 and worked fine
> on at least three machines here.

I see now that there's a 'bedtools-2.18' package that inherits from the
main 'bedtools'.  'bedtools-2.18', apparently needed by 'ribotaper', was
broken by your changes to 'bedtools'.

       Mark