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[igraph] Out of memory problem Kamadai Kawai layout
From: |
Diederik van Liere |
Subject: |
[igraph] Out of memory problem Kamadai Kawai layout |
Date: |
Tue, 27 Oct 2009 14:20:59 -0400 |
Dear Tamas,
I am trying to visualize a network with about 21000 vertices and 17000 edges on
a 4Gb macbook pro.
I get the following error message:
Python(31745) malloc: *** mmap(size=3614543872) failed (error code=12)
*** error: can't allocate region
*** set a breakpoint in malloc_error_break to debug
Traceback (most recent call last):
File
"/Users/diederik/Development/projectx/src/visualize_bugnetwork_igraph.py", line
44, in <module>
layout = g.layout_kamada_kawai()
igraph.core.InternalError: Error at ../../src/layout.c:548: , Out of memory
However, when I monitor memory usage in top, then I have still 1.6Gb free
memory. So do you have any suggestions to address this issue?
Best regards,
Diederik
- [igraph] Out of memory problem Kamadai Kawai layout,
Diederik van Liere <=