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Re: [igraph] Strange pagerank values


From: Tamás Nepusz
Subject: Re: [igraph] Strange pagerank values
Date: Tue, 19 Mar 2013 16:21:09 +0100

Hi,

> I am trying to compute pagerank for a graph and I am getting strange values 
> for pagerank. to my knowledge, the page rank values should be between 0 and 1 
> but i get very large or very small number (> 1 and < 0). I attach the .gml 
> file and here is the output. Please let me know what I am doing wrong or is 
> this graph some strange special case?
So I've tried your code with an experimental branch of igraph which uses the 
excellent PRPACK package to calculate PageRank scores instead of the ARPACK 
solver. The good news is that it works flawlessly with your graph as well as 
all our test cases. The not-so-good news is that it will make its way into 
igraph 0.7 only. In the 0.6.5 version, I found that lowering the damping value 
(i.e. increasing the teleportation probability during the PageRank calculation) 
seemed to resolve the stability issues for your particular graph; for instance, 
g.pagerank(damping=0.75) seems to work reliably:

>>> g = igraph.load(f)
>>> for i in xrange(1000):
...     pr = g.pagerank(damping=0.75)
...     if min(pr) < 0 or max(pr) > 1:
...         raise ValueError("bug")
... 

The above code snippet runs fine for me, meaning that PageRank managed to 
converge in all the 1000 executions. Note that changing the damping value 
changes the value of all the PageRank scores, but the ordering of the nodes 
should be the same (I guess).

Best,
-- 
Tamas




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