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From: | Gábor Csárdi |
Subject: | Re: [igraph] infomap unresponsive? on large graph in R env |
Date: | Mon, 12 May 2014 10:33:20 -0400 |
Hi,
has anyone any info on a memory limit of igraph which I may have missed in the documentation?
I'd really like to use igraph's implementation of InfoMap but run into the problem described below.
Thanks,
Alexander
> _______________________________________________
On May 6, 2014, at 11:21 AM, Alexander Struck <address@hidden> wrote:
> Dear all,
>
> while InfoMap runs smoothly on small graphs it appears to become unresponsive on larger ones. My .RObj has the size of 28 MB and igraph reports:
>> G
> IGRAPH DN-- 1282336 2507034 --
> + attr: name (v/c)
>
> The R v3.0.2 process now runs 14+ hours on one core out of 16, Ubuntu 12.04 uses 16 of the available 72 GB RAM. The latest igraph library version is installed.
> Should I be more patient? What are my options here? I could make the .RObj available on request.
>
> Many thanks and best regards,
>
> Alexander
>
>
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> address@hidden
> https://lists.nongnu.org/mailman/listinfo/igraph-help
Image Knowledge Gestaltung. An Interdisciplinary Laboratory
Cluster of Excellence Humboldt-Universität zu Berlin
Alexander Struck
Shaping Knowledge
Phone: +49 30 2093 46192
E-Mail: address@hidden
URL: www.interdisciplinary-laboratory.hu-berlin.de
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