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[Octave-bug-tracker] [bug #41440] pdb package: read_pdb(name of pdb) giv


From: Mike Miller
Subject: [Octave-bug-tracker] [bug #41440] pdb package: read_pdb(name of pdb) giving syntax error
Date: Thu, 06 Feb 2014 05:25:45 +0000
User-agent: Mozilla/5.0 (X11; Linux x86_64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/31.0.1650.63 Safari/537.36

Update of bug #41440 (project octave):

                  Status:               Need Info => Fixed                  
             Open/Closed:                    Open => Closed                 
                 Release:                   3.8.0 => other                  
        Operating System:                  Mac OS => Any                    

    _______________________________________________________

Follow-up Comment #4:

I get the following error with the latest (2009) release of the pdb package:


octave:1> p = read_pdb ("2zo3_pocket.pdb")
error: 'struct_contains' undefined near line 57 column 4
error: called from:
error:   /home/mike/octave/pdb-1.0.7/read_pdb.m at line 57, column 1


However, this has apparently been fixed in svn. If I use the current read_pdb
function from the Octave Forge svn repository

https://sourceforge.net/p/octave/code/HEAD/tree/trunk/octave-forge/extra/pdb/inst/read_pdb.m

it loads the attached PDB file successfully with no error. So all that is
needed is for someone interested in this package to make a release, preferably
someone willing to take over maintenance since it is now in the list of
"unmaintained" packages.

    _______________________________________________________

Reply to this item at:

  <http://savannah.gnu.org/bugs/?41440>

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