homebrew/science/arpack: stable 3.2.0, HEAD
ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.
https://github.com/opencollab/arpack-ng

atk: stable 2.18.0 (bottled)
GNOME accessibility toolkit
https://library.gnome.org/devel/atk/

autoconf: stable 2.69 (bottled)
Automatic configure script builder
https://www.gnu.org/software/autoconf

automake: stable 1.15 (bottled)
Tool for generating GNU Standards-compliant Makefiles
https://www.gnu.org/software/automake/

boost: stable 1.59.0 (bottled), HEAD
Collection of portable C++ source libraries
http://www.boost.org

cairo: stable 1.14.4 (bottled)
Vector graphics library with cross-device output support
http://cairographics.org/

cmake: stable 3.3.2 (bottled), HEAD
Cross-platform make
https://www.cmake.org/

d-bus: stable 1.10.0 (bottled)
Message bus system, providing inter-application communication
https://wiki.freedesktop.org/www/Software/dbus

epstool: stable 3.08 (bottled)
Edit preview images and fix bounding boxes in EPS files
http://pages.cs.wisc.edu/~ghost/gsview/epstool.htm

fftw: stable 3.3.4 (bottled)
C routines to compute the Discrete Fourier Transform
http://www.fftw.org

fontconfig: stable 2.11.1 (bottled)
XML-based font configuration API for X Windows
http://fontconfig.org/

freetype: stable 2.6 (bottled)
Software library to render fonts
http://www.freetype.org

gcc: stable 5.2.0 (bottled)
GNU compiler collection
https://gcc.gnu.org

gd: stable 2.1.1 (bottled), HEAD
Graphics library to dynamically manipulate images
https://libgd.github.io/

gdk-pixbuf: stable 2.32.2 (bottled)
Toolkit for image loading and pixel buffer manipulation
http://gtk.org

gettext: stable 0.19.6 (bottled)
GNU internationalization (i18n) and localization (l10n) library
https://www.gnu.org/software/gettext/

ghostscript: stable 9.16 (bottled), HEAD
Interpreter for PostScript and PDF
http://www.ghostscript.com/

giflib: stable 4.2.3 (bottled)
GIF library using patented LZW algorithm
http://giflib.sourceforge.net/

gl2ps: stable 1.3.8 (bottled)
OpenGL to PostScript printing library
http://www.geuz.org/gl2ps/

glib: stable 2.46.2 (bottled)
Core application library for C
https://developer.gnome.org/glib/

homebrew/science/glpk: stable 4.52
https://www.gnu.org/software/glpk/
/usr/local/Cellar/glpk/4.52 (10 files, 2,4M) *

gmp: stable 6.0.0a (bottled)
GNU multiple precision arithmetic library
https://gmplib.org/

gnu-sed: stable 4.2.2 (bottled)
GNU implementation of the famous stream editor
https://www.gnu.org/software/sed/

gnuplot: stable 5.0.1 (bottled), HEAD
Command-driven, interactive function plotting
http://www.gnuplot.info

gobject-introspection: stable 1.46.0 (bottled)
Generate introspection data for GObject libraries
https://live.gnome.org/GObjectIntrospection

graphicsmagick: stable 1.3.22 (bottled), HEAD
Image processing tools collection
http://www.graphicsmagick.org/

graphite2: stable 1.3.2 (bottled)
Smart font renderer for non-Roman scripts
https://scripts.sil.org/cms/scripts/page.php?site_id=projects&item_id=graphite_home

gsettings-desktop-schemas: stable 3.18.1 (bottled)
GSettings schemas for desktop components
https://download.gnome.org/sources/gsettings-desktop-schemas/

gtk+3: stable 3.18.3 (bottled)
Toolkit for creating graphical user interfaces
http://gtk.org/

harfbuzz: stable 1.0.4 (bottled), HEAD
OpenType text shaping engine
https://wiki.freedesktop.org/www/Software/HarfBuzz/

homebrew/science/hdf5: stable 1.8.15 (bottled)
File format designed to store large amounts of data
http://www.hdfgroup.org/HDF5

hicolor-icon-theme: stable 0.15 (bottled), HEAD
Fallback theme for FreeDesktop.org icon themes
https://wiki.freedesktop.org/www/Software/icon-theme/

icu4c: stable 55.1 (bottled), HEAD
C/C++ and Java libraries for Unicode and globalization
http://site.icu-project.org/

ilmbase: stable 2.2.0 (bottled)
OpenEXR ILM Base libraries (high dynamic-range image file format)
http://www.openexr.com/

imagemagick: stable 6.9.2-5 (bottled), HEAD
Tools and libraries to manipulate images in many formats
http://www.imagemagick.org

intltool: stable 0.51.0 (bottled)
String tool
https://wiki.freedesktop.org/www/Software/intltool

jasper: stable 1.900.1 (bottled)
Library for manipulating JPEG-2000 images
https://www.ece.uvic.ca/~frodo/jasper/

jbig2dec: stable 0.12 (bottled)
JBIG2 decoder and library (for monochrome documents)
http://ghostscript.com/jbig2dec.html

jpeg: stable 8d (bottled)
JPEG image manipulation library
http://www.ijg.org

libcroco: stable 0.6.9 (bottled)
CSS parsing and manipulation toolkit for GNOME
http://www.linuxfromscratch.org/blfs/view/svn/general/libcroco.html

libepoxy: stable 1.3.1 (bottled)
Library for handling OpenGL function pointer management
https://github.com/anholt/libepoxy

libffi: stable 3.0.13 (bottled), HEAD
Portable Foreign Function Interface library
https://sourceware.org/libffi/

libgsf: stable 1.14.34 (bottled), HEAD
I/O abstraction library for dealing with structured file formats
https://developer.gnome.org/gsf/

liblqr: stable 0.4.2, HEAD
C/C++ seam carving library
https://liblqr.wikidot.com/

libpng: stable 1.6.18 (bottled), HEAD
Library for manipulating PNG images
http://www.libpng.org/pub/png/libpng.html

librsvg: stable 2.40.11 (bottled)
Library to render SVG files using Cairo
https://live.gnome.org/LibRsvg

libtiff: stable 4.0.6 (bottled)
TIFF library and utilities
http://www.remotesensing.org/libtiff/

libtool: stable 2.4.6 (bottled)
Generic library support script
https://www.gnu.org/software/libtool/

libvpx: stable 1.4.0 (bottled), HEAD
VP8 video codec
https://www.webmproject.org/code/

libwmf: stable 0.2.8.4 (bottled)
Library for converting WMF (Window Metafile Format) files
http://wvware.sourceforge.net/libwmf.html

little-cms: stable 1.19 (bottled)
Version 1 of the Little CMS library
http://www.littlecms.com/

little-cms2: stable 2.7 (bottled)
Color management engine supporting ICC profiles
http://www.littlecms.com/

lua: stable 5.2.4 (bottled)
Powerful, lightweight programming language
http://www.lua.org/

makedepend: stable 1.0.5 (bottled)
Creates dependencies in makefiles
http://x.org

homebrew/science/metis4: stable 4.0.3 (bottled)
Serial graph partitioning and fill-reducing ordering
http://glaros.dtc.umn.edu/gkhome/views/metis

mysql: stable 5.7.9 (bottled)
Open source relational database management system
https://dev.mysql.com/doc/refman/5.7/en/

open-mpi: stable 1.10.0 (bottled), HEAD
High performance message passing library
https://www.open-mpi.org/

homebrew/science/openblas: stable 0.2.15 (bottled), HEAD
http://www.openblas.net/


openexr: stable 2.2.0 (bottled)
OpenEXR Graphics Tools (high dynamic-range image file format)
http://www.openexr.com/

openssl: stable 1.0.2d (bottled)
OpenSSL SSL/TLS cryptography library
https://openssl.org/

pango: stable 1.38.1 (bottled), HEAD
Framework for layout and rendering of i18n text
http://www.pango.org/

pcre: stable 8.37 (bottled), HEAD
Perl compatible regular expressions library
http://www.pcre.org/

pdflib-lite: stable 7.0.5p3 (bottled)
Subset of the functionality of PDFlib 7
http://www.pdflib.com/download/free-software/pdflib-lite/

pixman: stable 0.32.8 (bottled)
Low-level library for pixel manipulation
http://cairographics.org/

pkg-config: stable 0.29 (bottled)
Manage compile and link flags for libraries
https://wiki.freedesktop.org/www/Software/pkg-config/

plotutils: stable 2.6 (bottled)
GNU tools based on libplot, a multi-format 2-D vector graphics library
https://www.gnu.org/software/plotutils/

postgresql: stable 9.4.5 (bottled), devel 9.5beta1
Object-relational database system
https://www.postgresql.org/

pstoedit: stable 3.70 (bottled)
Convert PostScript and PDF files to editable vector graphics
http://www.pstoedit.net

homebrew/science/qhull: stable 2012.1
Qhull is a code for computing convex hulls in n dimensions.
http://www.qhull.org/

homebrew/science/qrupdate: stable 1.1.2 (bottled)
http://sourceforge.net/projects/qrupdate/
/usr/local/Cellar/qrupdate/1.1.2_2 (6 files, 356K)

qt: stable 4.8.7 (bottled), HEAD
Cross-platform application and UI framework
https://www.qt.io/

readline: stable 6.3.8 (bottled)
Library for command-line editing
https://tiswww.case.edu/php/chet/readline/rltop.html

homebrew/science/suite-sparse421: stable 4.2.1
Suite of Sparse Matrix Software
http://faculty.cse.tamu.edu/davis/suitesparse.html

szip: stable 2.1 (bottled)
Implementation of extended-Rice lossless compression algorithm
https://www.hdfgroup.org/HDF5/release/obtain5.html#extlibs

tbb: stable 4.4-20150728 (bottled)
Rich and complete approach to parallelism in C++
https://www.threadingbuildingblocks.org/

texinfo: stable 6.0 (bottled)
Official documentation format of the GNU project
https://www.gnu.org/software/texinfo/

homebrew/science/veclibfort: stable 0.4.2 (bottled), HEAD
GNU Fortran compatibility for Apple's vecLib
https://github.com/mcg1969/vecLibFort

webp: stable 0.4.3 (bottled), HEAD
Image format providing lossless and lossy compression for web images
https://developers.google.com/speed/webp/

wxmac: stable 3.0.2 (bottled)
wxWidgets, a cross-platform C++ GUI toolkit (for OS X)
https://www.wxwidgets.org

xz: stable 5.2.2 (bottled)
General-purpose data compression with high compression ratio
http://tukaani.org/xz/

yasm: stable 1.3.0 (bottled), HEAD
Modular BSD reimplementation of NASM
http://yasm.tortall.net/