Re: [Bug-gsl] missing "libgsl.0.dylib"

[Bongkeun Song]

Hi Peter,

I tried to uninstall GSL2.1 but I got the following message:

Bongkeuns-MacBook-Pro:gsl songb$ sudo make uninstall
Password:
make: *** No rule to make target `uninstall'.  Stop.
Bongkeuns-MacBook-Pro:gsl songb$ make uninstall
make: *** No rule to make target `uninstall'.  Stop.
Bongkeuns-MacBook-Pro:gsl songb$ make uninstall
make: *** No rule to make target `uninstall'.  Stop.
Bongkeuns-MacBook-Pro:gsl songb$ sudo make uninstall
make: *** No rule to make target `uninstall'.  Stop.


I started with make clean and make distclean, then type sudo make uninstall.

Anyway, I downloaded GSL1.6 and started to install but I got another error 
message:

In file included from fp.c:34:
./fp-darwin.c:20:10: fatal error: 'architecture/ppc/fp_regs.h' file not found
#include <architecture/ppc/fp_regs.h>
         ^
1 error generated.
make[2]: *** [fp.lo] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2


Bongkeun (BK) Song Ph.D.
Associate Professor
Department of Biological Sciences
Virginia Institute of Marine Science
College of William & Mary
P.O. Box 1346
Gloucester Point, VA 23062
Tel: 804-684-7411
Fax: 804-684-7399
Email: address@hidden<mailto:address@hidden>




On Jan 13, 2016, at 8:13 PM, Peter Johansson 
<address@hidden<mailto:address@hidden>> wrote:

Hi BK,

If you won't use GSL for anything else I suggest you uninstall GSL2.1. If you 
intend to use GSL for other applications, I suggest you install GSL1.6 and then 
install GSL2.1 on top of it so other builds will pick the latest (and best) 
version.

Cheers,
Peter

On 01/14/2016 10:51 AM, Bongkeun Song wrote:
Thanks. Peter.

Should I uninstall the GSL2.1 first before I reinstall the GSL1.16?

BK

Sent from my iPhone

On Jan 13, 2016, at 7:40 PM, Peter Johansson 
<<mailto:address@hidden>address@hidden<mailto:address@hidden>> wrote:

Hi Bongkeun,

Please always cc bug-gsl; others might be interested.

Alright, that makes all sense. So it looks like 'pplacer' was built against GSL 
v1.x. I suggest you either rebuild the 'pplacer' against GSL v2.1 or that you 
install the latest version of GSL 1.x, which should be 1.16.

Hope that helps,

Peter

On 01/13/2016 10:59 PM, Bongkeun Song wrote:
Hi Peter

thank you for quick response.

Here is the list of libgsl in /usr/lib/

/usr/local/lib/libgsl.19.dylib /usr/local/lib/libgslcblas.0.dylib
/usr/local/lib/libgsl.a /usr/local/lib/libgslcblas.a
/usr/local/lib/libgsl.dylib /usr/local/lib/libgslcblas.dylib
/usr/local/lib/libgsl.la /usr/local/lib/libgslcblas.la

Bongkeun (BK) Song Ph.D.
Associate Professor
Department of Biological Sciences
Virginia Institute of Marine Science
College of William & Mary
P.O. Box 1346
Gloucester Point, VA 23062
Tel: 804-684-7411
Fax: 804-684-7399
Email: address@hidden<mailto:address@hidden>




On Jan 13, 2016, at 3:23 AM, Peter Johansson 
<address@hidden<mailto:address@hidden>> wrote:



On 01/13/2016 02:28 PM, Bongkeun Song wrote:
Dear GSL support team,

I am trying to use the pplacer program, which needs to have “libgsl.0.dylib” in 
“/usr/local/lib/“ directory. Please see the error message below.


Bongkeuns-MacBook-Pro:pplacer songb$ ./pplacer
dyld: Library not loaded: /usr/local/lib/libgsl.0.dylib
  Referenced from: /Users/songb/pplacer/./pplacer
  Reason: image not found
Trace/BPT trap: 5


I was looking for the dylib in my Mac but cannot locate it. Is there a way to 
build the dylib?

How have you tried to install gsl?

Have you tried installing it from the tarball with the usual

$ ./configure
$ make all
$ make install

If yes, what does 'ls /usr/local/lib/libgsl*' say?

Cheers,
Peter
GSL user, not maintainer