bug#48774: closed ([PATCH] Fix build of python-scanpy)

[GNU bug Tracking System]

Your message dated Fri, 04 Jun 2021 23:58:09 +0200
with message-id <b4dde66852e631dcc1d10f45b0a66880be1262d0.camel@gnu.org>
and subject line Re: bug#48774: [PATCH] Fix build of python-scanpy
has caused the debbugs.gnu.org bug report #48774,
regarding [PATCH] Fix build of python-scanpy
to be marked as done.

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48774: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=48774
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--- Begin Message --- Subject: [PATCH] Fix build of python-scanpy Date: Tue, 1 Jun 2021 10:33:34 +0200 User-agent: Mozilla/5.0 (X11; Linux x86_64; rv:78.0) Gecko/20100101 Thunderbird/78.8.1

Dear Guix,

The attached two patches update python-anndata and python-scanpy, which effectively fix the build for python-scanpy.

python-anndata switched to a PEP518 setup instead of the regular Python "setup.py" approach.  So with some help on IRC, I added custom phases inspired by the python-tinycss2 package.

Kind regards,
Roel Janssen

0001-gnu-python-anndata-Update-to-0.7.6.patch
Description: Text Data

0002-gnu-python-scanpy-Update-to-1.7.2.patch
Description: Text Data

--- End Message ---

> --- Begin Message ---
>
>
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> Subject: 
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> Re: bug#48774: [PATCH] Fix build of python-scanpy
>
>
>
>
> Date: 
>
> Fri, 04 Jun 2021 23:58:09 +0200
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>
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>
> User-agent: 
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> Evolution 3.40.1 (3.40.1-1.fc34) 
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>
>
>
> Hi Mathieu,
>
> On Fri, 2021-06-04 at 13:54 +0200, Mathieu Othacehe wrote:
> > 
> > Hello Roel,
> > 
> > > The attached two patches update python-anndata and python-scanpy,
> > > which
> > > effectively fix the build for python-scanpy.
> > 
> > Both patches look fine to me.
> > 
>
> Thanks for looking at them!  I rebuilt python-scanpy with these patches
> on the latest master, and pushed these patches.
>
> Kind regards,
> Roel Janssen
>
>
>
> --- End Message ---