bug#66930: closed ([PATCH] gnu: Add python-pyamg.)

[GNU bug Tracking System]

Your message dated Sun, 21 Jan 2024 17:44:19 +0000
with message-id <874jf6oa30.fsf@gmail.com>
and subject line [PATCH] gnu: Add python-pyamg.
has caused the debbugs.gnu.org bug report #66930,
regarding [PATCH] gnu: Add python-pyamg.
to be marked as done.

(If you believe you have received this mail in error, please contact
help-debbugs@gnu.org.)


-- 
66930: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=66930
GNU Bug Tracking System
Contact help-debbugs@gnu.org with problems
> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add python-pyamg.
>
>
>
>
> Date: 
>
> Sat,  4 Nov 2023 15:05:56 +0000
>
>
>
>
> * gnu/packages/python-science.scm (python-pyamg): New variable.
>
> Change-Id: Ibf39fecd14d4e6fd72078b217737e5e5cbbf2321
> ---
>  gnu/packages/python-science.scm | 36 +++++++++++++++++++++++++++++++++
>  1 file changed, 36 insertions(+)
>
> diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
> index 4063797a30..1c2edda118 100644
> --- a/gnu/packages/python-science.scm
> +++ b/gnu/packages/python-science.scm
> @@ -387,6 +387,42 @@ (define-public python-trimesh
>  library.")
>      (license license:expat)))
>  
> +(define-public python-pyamg
> +  (package
> +    (name "python-pyamg")
> +    (version "5.0.0")
> +    (source (origin
> +              (method url-fetch)
> +              (uri (pypi-uri "pyamg" version))
> +              (sha256
> +               (base32
> +                "0bm0cbqcj5zgs4k7djs5ga98pb95raxxdd674g744hv1iwi6gfga"))))
> +    (build-system pyproject-build-system)
> +    (propagated-inputs (list pybind11 python-numpy python-scipy))
> +    (native-inputs (list python-setuptools-scm python-pytest))
> +    (arguments
> +     (list
> +      #:test-flags
> +      ;; Test installed package in order to find C++ modules.
> +      #~(list "--pyargs" "pyamg.tests")))
> +    (home-page "https://github.com/pyamg/pyamg";)
> +    (synopsis "Algebraic Multigrid Solvers in Python")
> +    (description "PyAMG is a Python library of Algebraic Multigrid
> +(AMG) solvers.
> +
> +PyAMG features implementations of:
> +@itemize
> +@item Ruge-Stuben (RS) or Classical AMG
> +@item AMG based on Smoothed Aggregation (SA)
> +@item Adaptive Smoothed Aggregation (αSA)
> +@item Compatible Relaxation (CR)
> +@item Krylov methods such as CG, GMRES, FGMRES, BiCGStab, MINRES, etc.
> +@end itemize
> +PyAMG is primarily written in Python with supporting C++ code for
> +performance critical operations.
> +")
> +    (license license:expat)))
> +
>  (define-public python-tspex
>    (package
>      (name "python-tspex")
>
> base-commit: 9dcd8802f5bc472579f23a38dcf437f8a9ac976c
> -- 
> 2.42.0
>
>
>
>
> --- End Message ---

--- Begin Message --- Subject: [PATCH] gnu: Add python-pyamg. Date: Sun, 21 Jan 2024 17:44:19 +0000

I've apply changes to the patch:
- updated to the latest upstream version 5.0.1
- move propagated and native inputs after arguments
- move pybind11 to native-inputs


--8<---------------cut here---------------start------------->8---
@@ -460,21 +460,21 @@ (define-public python-meshzoo
 (define-public python-pyamg
   (package
     (name "python-pyamg")
-    (version "5.0.0")
+    (version "5.0.1")
     (source (origin
               (method url-fetch)
               (uri (pypi-uri "pyamg" version))
               (sha256
                (base32
-                "0bm0cbqcj5zgs4k7djs5ga98pb95raxxdd674g744hv1iwi6gfga"))))
+                "0l3dliwynxyjvbgpmi2k8jqvkkw6fc00c8w69h6swhrkfh0ql12z"))))
     (build-system pyproject-build-system)
-    (propagated-inputs (list pybind11 python-numpy python-scipy))
-    (native-inputs (list python-setuptools-scm python-pytest))
     (arguments
      (list
       #:test-flags
       ;; Test installed package in order to find C++ modules.
       #~(list "--pyargs" "pyamg.tests")))
+    (native-inputs (list pybind11 python-pytest python-setuptools-scm))
+    (propagated-inputs (list python-numpy python-scipy))
     (home-page "https://github.com/pyamg/pyamg";)
     (synopsis "Algebraic Multigrid Solvers in Python")
     (description "PyAMG is a Python library of Algebraic Multigrid
@@ -489,8 +489,7 @@ (define-public python-pyamg
 @item Krylov methods such as CG, GMRES, FGMRES, BiCGStab, MINRES, etc.
 @end itemize
 PyAMG is primarily written in Python with supporting C++ code for
-performance critical operations.
-")
+performance critical operations.")
     (license license:expat)))

 (define-public python-tspex
--8<---------------cut here---------------end--------------->8---

Pushe as 5f93aa182a32e4baecc6238c21d2538af0b18ad3

Thanks,
Oleg

signature.asc
Description: PGP signature

--- End Message ---