On Thursday 29 July 2010 20:54:32 Mikheil Azatov wrote:
> Hi Espresso users,
>
> I wanted to ask question about self-avoiding random walk. Does anyone know
> how does it actually work in polymers? After I create all the polymers the
> minimum distance(calculated with analyze mindist) between monomers is
> always less then shield value in SAW option. I know for sure that if I
> increase number of polymers it fails to put all of them in the simulation
> box so the algorithm has to check the distances with all other particles,
> but how does it check them if the minimum distance becomes less then shield
> ?
Can you post your script? Otherwise, it is difficult to say what happens. For