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Re: [ESPResSo-users] visualization problem
From: |
Ulf Schiller |
Subject: |
Re: [ESPResSo-users] visualization problem |
Date: |
Tue, 24 Jun 2014 09:02:28 +0100 |
User-agent: |
Mozilla/5.0 (X11; Linux x86_64; rv:17.0) Gecko/20130510 Thunderbird/17.0.6 |
On 24/06/14 08:30, Narges Nikoofard wrote:
> I am simulating a system composed of around 60 polymers in a simulation
> box of length 20. In this system, many polymers cross the boundary and
> some of their monomers appear from the other side of the box. As a
> result, the bonds are stretched across the simulation box, which makes a
> mess in the visualization.
>
> I wonder if there is a way to tell VMD not to show the bonds between the
> monomers (specially bonds that are stretched across the simulation box).
> I would be grateful if someone could kindly help me in this matter.
This is a VMD related question and has been discussed on the VMD mailing
list:
http://lmgtfy.com/?q=is+there+a+way+to+tell+VMD+not+to+show+the+bonds
Cheers,
Ulf
--
Dr Ulf D Schiller
Centre for Computational Science
University College London
20 Gordon Street
London WC1H 0AJ
United Kingdom