[Gsrc-commit] trunk r9715: update prokka to 1.14.5

[Carl Hansen]

------------------------------------------------------------
revno: 9715
revision-id: carlhansen@gnu.org-20231126081022-xrcm8ofz9bvcbohs
parent: carlhansen@gnu.org-20231126062522-ftu27imflqprq54g
committer: carlhansen@gnu.org
branch nick: trunk
timestamp: Sun 2023-11-26 00:10:22 -0800
message:
  update prokka to 1.14.5
modified:
  pkg/bio/prokka/Makefile        makefile-20160617195624-kwz1a09vkg4le6fu-160
  pkg/bio/prokka/sha256sums      sha256sums-20160617195624-kwz1a09vkg4le6fu-161

=== modified file 'pkg/bio/prokka/Makefile'
--- a/pkg/bio/prokka/Makefile   2016-06-17 19:57:40 +0000
+++ b/pkg/bio/prokka/Makefile   2023-11-26 08:10:22 +0000
@@ -1,4 +1,5 @@
 # Copyright © 2013, 2014 Brandon Invergo <brandon@invergo.net>
+# Copyright © 2023 Carl Hansen
 #
 # This file is part of GSRC.
 #
@@ -17,7 +18,7 @@
 
 NAME = Prokka
 GARNAME = prokka
-GARVERSION = 1.10
+GARVERSION = 1.14.5
 HOME_URL = http://www.bioinformatics.net.au/software.prokka.shtml
 DESCRIPTION = Rapid prokaryotic genome annotation
 define BLURB
@@ -27,15 +28,15 @@
 CITE = doi:10.1093/bioinformatics/btu153
 
 ######################################################################
-
-MASTER_SITES = http://www.vicbioinformatics.com/
-MASTER_SUBDIR =
-DISTFILES = $(DISTNAME).tar.gz
+# https://github.com/tseemann/prokka/archive/refs/tags/v1.14.5.tar.gz
+MASTER_SITES = https://github.com/
+MASTER_SUBDIR = tseemann/prokka/archive/refs/tags/
+DISTFILES = v$(GARVERSION).tar.gz
 INSTALL_SCRIPTS = scripts db
 
 BUILDDEPS =
-LIBDEPS = perl-bioperl ncbi-blast hmmer aragorn prodigal ncbi-tools \
-       parallel infernal barrnap minced
+LIBDEPS =# perl-bioperl ncbi-blast hmmer aragorn prodigal ncbi-tools \
+#      parallel infernal barrnap minced
 
 ######################################################################
 
@@ -67,3 +68,5 @@
                $(INSTALL_BIN) $(WORKSRC)/bin/$$s; \
        done
        $(MAKECOOKIE)
+
+

=== modified file 'pkg/bio/prokka/sha256sums'
--- a/pkg/bio/prokka/sha256sums 2016-06-17 19:57:40 +0000
+++ b/pkg/bio/prokka/sha256sums 2023-11-26 08:10:22 +0000
@@ -1,1 +1,1 @@
-7f95adff99c05a359904483ac52ba011b606c5314eccfb2f29ab31ff957f6b00  
download/prokka-1.10.tar.gz
+03550e44db5acfb2b583a4a9eef4b500c2cc33ccad08a9282cdd2764950f6876  
download/v1.14.5.tar.gz