01/01: gnu: Add r-genie3.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit d85c0f98424444eee10c721a03b400498cc89a6a
Author: Ricardo Wurmus <address@hidden>
Date:   Fri Aug 30 22:42:29 2019 +0200

    gnu: Add r-genie3.
    
    * gnu/packages/bioconductor.scm (r-genie3): New variable.
---
 gnu/packages/bioconductor.scm | 21 +++++++++++++++++++++
 1 file changed, 21 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index ea43bf2..b7bc58d 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -5230,3 +5230,24 @@ cis-regulatory topics (cisTopics) from single cell 
epigenomics data, and
 includes functionalities to identify cell states based on the contribution of
 cisTopics and explore the nature and regulatory proteins driving them.")
       (license license:gpl3))))
+
+(define-public r-genie3
+  (package
+    (name "r-genie3")
+    (version "1.6.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "GENIE3" version))
+       (sha256
+        (base32
+         "0lvrpw4xn7xyinmn13f65i0vkzfzwdj5y8gsa8vyy8kcn83d28fx"))))
+    (properties `((upstream-name . "GENIE3")))
+    (build-system r-build-system)
+    (propagated-inputs `(("r-reshape2" ,r-reshape2)))
+    (home-page "https://bioconductor.org/packages/GENIE3";)
+    (synopsis "Gene network inference with ensemble of trees")
+    (description
+     "This package implements the GENIE3 algorithm for inferring gene
+regulatory networks from expression data.")
+    (license license:gpl2+)))