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35/288: gnu: r-glimma: Update to 2.0.0.
From: |
guix-commits |
Subject: |
35/288: gnu: r-glimma: Update to 2.0.0. |
Date: |
Thu, 19 Nov 2020 10:22:42 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit 0d59ccd03bb5c5f07516b3fc93aa7257648cd4f2
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:48:42 2020 +0100
gnu: r-glimma: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
---
gnu/packages/bioconductor.scm | 12 ++++++++----
1 file changed, 8 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 066ba73..ee31f71 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2220,20 +2220,24 @@ defined categories which are over/under represented in
RNA-seq data.")
(define-public r-glimma
(package
(name "r-glimma")
- (version "1.16.0")
+ (version "2.0.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Glimma" version))
(sha256
(base32
- "1bxfgwjqb9p400a5a5q6p17kcnl3ddz090llihkfih9kyxii9n4y"))))
+ "0gy30v30lw27frhmw39pzacqzrv2vwj5rsp6gb3yifllrahdiffv"))))
(properties `((upstream-name . "Glimma")))
(build-system r-build-system)
(propagated-inputs
- `(("r-edger" ,r-edger)
+ `(("r-deseq2" ,r-deseq2)
+ ("r-edger" ,r-edger)
+ ("r-htmlwidgets" ,r-htmlwidgets)
("r-jsonlite" ,r-jsonlite)
- ("r-s4vectors" ,r-s4vectors)))
+ ("r-limma" ,r-limma)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/Shians/Glimma";)
- 155/288: gnu: r-bigmelon: Update to 1.16.0., (continued)
- 155/288: gnu: r-bigmelon: Update to 1.16.0., guix-commits, 2020/11/19
- 154/288: gnu: r-gdsfmt: Update to 1.26.0., guix-commits, 2020/11/19
- 160/288: gnu: r-variantfiltering: Update to 1.26.0., guix-commits, 2020/11/19
- 166/288: gnu: r-bhc: Update to 1.42.0., guix-commits, 2020/11/19
- 169/288: gnu: r-rsbml: Update to 2.48.0., guix-commits, 2020/11/19
- 172/288: gnu: r-biggr: Update to 1.26.0., guix-commits, 2020/11/19
- 176/288: gnu: r-bioassayr: Update to 1.28.0., guix-commits, 2020/11/19
- 186/288: gnu: r-biocor: Update to 1.14.0., guix-commits, 2020/11/19
- 187/288: gnu: r-biocpkgtools: Update to 1.8.0., guix-commits, 2020/11/19
- 191/288: gnu: r-pcatools: Update to 2.2.0., guix-commits, 2020/11/19
- 35/288: gnu: r-glimma: Update to 2.0.0.,
guix-commits <=
- 120/288: gnu: r-iclusterplus: Update to 1.26.0., guix-commits, 2020/11/19
- 123/288: gnu: r-rhisat2: Update to 1.6.0., guix-commits, 2020/11/19
- 135/288: gnu: r-flowcore: Update to 2.2.0., guix-commits, 2020/11/19
- 157/288: gnu: r-reqon: Update to 1.36.0., guix-commits, 2020/11/19
- 168/288: gnu: r-bifet: Update to 1.10.0., guix-commits, 2020/11/19
- 173/288: gnu: r-bigmemoryextras: Update to 1.38.0., guix-commits, 2020/11/19
- 182/288: gnu: r-biocgraph: Update to 1.52.0., guix-commits, 2020/11/19
- 179/288: gnu: r-reactomepa: Update to 1.34.0., guix-commits, 2020/11/19
- 188/288: gnu: r-biocset: Update to 1.4.0., guix-commits, 2020/11/19
- 185/288: gnu: r-bioconcotk: Update to 1.10.0., guix-commits, 2020/11/19