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35/318: gnu: r-glimma: Update to 2.0.0.
From: |
guix-commits |
Subject: |
35/318: gnu: r-glimma: Update to 2.0.0. |
Date: |
Fri, 20 Nov 2020 08:39:37 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit 4c14809bcde4f7c3e211db9fd0ae88a991f3a2fc
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:48:42 2020 +0100
gnu: r-glimma: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
---
gnu/packages/bioconductor.scm | 12 ++++++++----
1 file changed, 8 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 066ba73..ee31f71 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2220,20 +2220,24 @@ defined categories which are over/under represented in
RNA-seq data.")
(define-public r-glimma
(package
(name "r-glimma")
- (version "1.16.0")
+ (version "2.0.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Glimma" version))
(sha256
(base32
- "1bxfgwjqb9p400a5a5q6p17kcnl3ddz090llihkfih9kyxii9n4y"))))
+ "0gy30v30lw27frhmw39pzacqzrv2vwj5rsp6gb3yifllrahdiffv"))))
(properties `((upstream-name . "Glimma")))
(build-system r-build-system)
(propagated-inputs
- `(("r-edger" ,r-edger)
+ `(("r-deseq2" ,r-deseq2)
+ ("r-edger" ,r-edger)
+ ("r-htmlwidgets" ,r-htmlwidgets)
("r-jsonlite" ,r-jsonlite)
- ("r-s4vectors" ,r-s4vectors)))
+ ("r-limma" ,r-limma)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/Shians/Glimma")
- 95/318: gnu: r-allelicimbalance: Update to 1.28.0., (continued)
- 95/318: gnu: r-allelicimbalance: Update to 1.28.0., guix-commits, 2020/11/20
- 93/318: gnu: r-annotationfuncs: Update to 1.40.0., guix-commits, 2020/11/20
- 87/318: gnu: r-motifbreakr: Update to 2.4.0., guix-commits, 2020/11/20
- 106/318: gnu: r-yarn: Update to 1.16.0., guix-commits, 2020/11/20
- 110/318: gnu: r-xcms: Update to 3.12.0., guix-commits, 2020/11/20
- 31/318: gnu: r-interactionset: Update to 1.18.0., guix-commits, 2020/11/20
- 01/318: gnu: r-ideoviz: Update to 1.26.0., guix-commits, 2020/11/20
- 19/318: gnu: r-diffbind: Update to 3.0.0., guix-commits, 2020/11/20
- 27/318: gnu: r-bayseq: Update to 2.24.0., guix-commits, 2020/11/20
- 26/318: gnu: r-qdnaseq: Update to 1.26.0., guix-commits, 2020/11/20
- 35/318: gnu: r-glimma: Update to 2.0.0.,
guix-commits <=
- 34/318: gnu: r-goseq: Update to 1.42.0., guix-commits, 2020/11/20
- 36/318: gnu: r-rots: Update to 1.18.0., guix-commits, 2020/11/20
- 38/318: gnu: r-inspect: Update to 1.20.0., guix-commits, 2020/11/20
- 46/318: gnu: r-copynumber: Update to 1.30.0., guix-commits, 2020/11/20
- 45/318: gnu: r-chipexoqual: Update to 1.14.0., guix-commits, 2020/11/20
- 43/318: gnu: r-destiny: Update to 3.4.0., guix-commits, 2020/11/20
- 42/318: gnu: r-biocsingular: Update to 1.6.0., guix-commits, 2020/11/20
- 47/318: gnu: r-dnacopy: Update to 1.64.0., guix-commits, 2020/11/20
- 41/318: gnu: r-biocneighbors: Update to 1.8.0., guix-commits, 2020/11/20
- 53/318: gnu: r-mast: Update to 1.16.0., guix-commits, 2020/11/20