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27/131: gnu: python-screed: Adjust following Python build system changes
From: |
guix-commits |
Subject: |
27/131: gnu: python-screed: Adjust following Python build system changes. |
Date: |
Fri, 29 Jan 2021 09:21:49 -0500 (EST) |
apteryx pushed a commit to branch cu/farewell-to-pythonpath
in repository guix.
commit 215e66acf61958a78cb73c1a1b098348ad152d68
Author: Maxim Cournoyer <maxim.cournoyer@gmail.com>
AuthorDate: Fri Jan 22 13:16:52 2021 -0500
gnu: python-screed: Adjust following Python build system changes.
* gnu/packages/bioinformatics.scm (python-screed)[arguments]: Remove field,
no
longer necessary.
---
gnu/packages/bioinformatics.scm | 19 -------------------
1 file changed, 19 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index b371cab..a1f3287 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6295,25 +6295,6 @@ complexity samples.")
(base32
"148vcb7w2wr6a4w6vs2bsxanbqibxfk490zbcbg4m61s8669zdjx"))))
(build-system python-build-system)
- (arguments
- '(#:phases
- (modify-phases %standard-phases
- ;; Tests must be run after installation, as the "screed" command does
- ;; not exist right after building.
- (delete 'check)
- (add-after 'install 'check
- (lambda* (#:key inputs outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out")))
- (setenv "PYTHONPATH"
- (string-append out "/lib/python"
- (string-take (string-take-right
- (assoc-ref inputs "python")
- 5) 3)
- "/site-packages:"
- (getenv "PYTHONPATH")))
- (setenv "PATH" (string-append out "/bin:" (getenv "PATH"))))
- (invoke "python" "setup.py" "test")
- #t)))))
(native-inputs
`(("python-pytest" ,python-pytest)
("python-pytest-cov" ,python-pytest-cov)
- 11/131: gnu: python-slugify: Add missing input., (continued)
- 11/131: gnu: python-slugify: Add missing input., guix-commits, 2021/01/29
- 12/131: gnu: python-websockets: Fix Python package name., guix-commits, 2021/01/29
- 14/131: gnu: python-traitlets: Add missing input., guix-commits, 2021/01/29
- 15/131: gnu: python-idna-ssl: Add missing input., guix-commits, 2021/01/29
- 17/131: gnu: python-automat: Remove broken console script., guix-commits, 2021/01/29
- 07/131: gnu: python-pytest-xdist: Add missing input, relax pytest requirement., guix-commits, 2021/01/29
- 16/131: gnu: python-twisted: Remove broken console scripts., guix-commits, 2021/01/29
- 22/131: gnu: solaar: Do not read PYTHONPATH from environment., guix-commits, 2021/01/29
- 21/131: gnu: python2-virtualenv: Fix build., guix-commits, 2021/01/29
- 25/131: gnu: python-pysam: Adjust following Python build system changes., guix-commits, 2021/01/29
- 27/131: gnu: python-screed: Adjust following Python build system changes.,
guix-commits <=
- 30/131: gnu: python-xmlschema: Do not set PYTHONPATH., guix-commits, 2021/01/29
- 13/131: gnu: python-black: Remove blackd., guix-commits, 2021/01/29
- 19/131: gnu: python-traceback2: Add missing dependency., guix-commits, 2021/01/29
- 23/131: gnu: intel-xed: Adjust build phase., guix-commits, 2021/01/29
- 18/131: gnu: python-packaging-bootstrap: Remove dependency., guix-commits, 2021/01/29
- 24/131: gnu: python-pybedtools: Streamline following Python build system changes., guix-commits, 2021/01/29
- 26/131: gnu: bamm: Update following changes to the Python build system., guix-commits, 2021/01/29
- 28/131: gnu: python-scanpy: Do not set PYTHONPATH., guix-commits, 2021/01/29
- 29/131: gnu: python-loompy: Do not set PYTHONPATH., guix-commits, 2021/01/29
- 20/131: gnu: python2-packaging-bootstrap: Add missing dependency, guix-commits, 2021/01/29