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01/04: gnu: Add python-illumina-utils.
From: |
guix-commits |
Subject: |
01/04: gnu: Add python-illumina-utils. |
Date: |
Thu, 1 Jun 2023 14:48:47 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 525ef60ff43f682ff22dc6c7d23d095225287022
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Jun 1 14:57:13 2023 +0200
gnu: Add python-illumina-utils.
* gnu/packages/bioinformatics.scm (python-illumina-utils): New variable.
---
gnu/packages/bioinformatics.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index b3b10af193..34d4a2e08c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4639,6 +4639,26 @@ analysis tool Scanpy (Genome Biology, 2018).")
exploration.")
(license license:gpl3+)))
+(define-public python-illumina-utils
+ (package
+ (name "python-illumina-utils")
+ (version "2.12")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "illumina-utils" version))
+ (sha256
+ (base32
+ "0z9g0prj7pmgl5z4vdpxv3v30grzhc194801qnf0wqzgy7w3aj2s"))))
+ (build-system pyproject-build-system)
+ (arguments (list #:tests? #false)) ;there are none
+ (propagated-inputs (list python-matplotlib python-numpy
python-levenshtein))
+ (home-page "https://github.com/meren/illumina-utils")
+ (synopsis "Library and scripts to work with Illumina paired-end data")
+ (description
+ "This package provides a library and collection of scripts to work with
+Illumina paired-end data (for CASAVA 1.8+).")
+ (license license:gpl2+)))
+
(define-public exonerate
(package
(name "exonerate")