23/26: gnu: Add python-jwst.

[guix-commits]

efraim pushed a commit to branch master
in repository guix.

commit 339be9dad527bb0805e35dc1816cf373d445ed91
Author: Sharlatan Hellseher <sharlatanus@gmail.com>
AuthorDate: Tue May 30 20:58:48 2023 +0100

    gnu: Add python-jwst.
    
    * gnu/packages/astronomy.scm (python-jwst): New variable.
    
    Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
---
 gnu/packages/astronomy.scm | 67 ++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 67 insertions(+)

diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index 507bff7835..cdb6750f09 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -2926,6 +2926,73 @@ Moon position, etc.")
 JPL ephemerides use to predict raw (x,y,z) planetary positions.")
     (license license:expat)))
 
+(define-public python-jwst
+  (package
+    (name "python-jwst")
+    (version "1.10.2")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "jwst" version))
+              (sha256
+               (base32
+                "1lmfyw2y7c84rs9xqavah9aidj478ijiiijlz6fag11xqn1vs98y"))))
+    (build-system pyproject-build-system)
+    (arguments
+     (list
+      ;; XXX: Tests require access to https://jwst-crds-pub.stsci.edu server 
for
+      ;; getting data sets.
+      #:tests? #f
+      #:phases #~(modify-phases %standard-phases
+                   ;; NOTE: (Sharlatan-20230529T113448+0100): opencv-python's
+                   ;; version can't be detected, it could the way it's packed 
in
+                   ;; Guix. Review failing sanity check with more efforts,
+                   ;; disable for now to make package buildable.
+                   (delete 'sanity-check))))
+    ;; opencv provides OpenCV-Python which is Listed as install requirement.
+    (propagated-inputs (list opencv
+                             python-asdf
+                             python-asdf-astropy
+                             python-astropy
+                             python-bayesicfitting
+                             python-crds
+                             python-drizzle
+                             python-gwcs
+                             python-jsonschema
+                             python-numpy
+                             python-photutils
+                             python-poppy
+                             python-psutil
+                             python-pyparsing
+                             python-requests
+                             python-scikit-image
+                             python-scipy
+                             python-spherical-geometry
+                             python-stcal
+                             python-stdatamodels
+                             python-stpipe
+                             python-stsci-image
+                             python-stsci-imagestats
+                             python-tweakwcs
+                             python-wiimatch))
+    (native-inputs (list python-codecov
+                         python-colorama
+                         python-flake8
+                         python-pytest
+                         python-pytest-cov
+                         python-pytest-doctestplus
+                         python-pytest-openfiles
+                         python-requests-mock
+                         python-setuptools-scm))
+    (home-page "https://jwst-pipeline.readthedocs.io/en/latest/";)
+    (synopsis
+     "Python library for science observations from the James Webb Space 
Telescope")
+    (description
+     "This package provides an access to the JWST Science Calibration Pipeline
+processes data from all JWST instruments and observing modes by applying 
various
+science corrections sequentially, producing both fully-calibrated individual
+exposures and high-level data products (mosaics, extracted spectra, etc.).")
+    (license license:bsd-3)))
+
 (define-public python-pyerfa
   (package
     (name "python-pyerfa")