19/57: gnu: r-spectra: Disable tests.

[guix-commits]

rekado pushed a commit to branch r-team
in repository guix.

commit 99133366a4ba13573c786830bd954a416c8512c0
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Nov 26 15:42:38 2024 +0100

    gnu: r-spectra: Disable tests.
    
    * gnu/packages/bioconductor.scm (r-spectra)[arguments]: Disable tests.
    [native-inputs]: Add missing inputs r-mzr and r-patrick.
    
    Change-Id: I7d9dca3c1f17c0a57d7b6cc7479e08ea5bb11843
---
 gnu/packages/bioconductor.scm | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 9a1b5d9664..845c05ea04 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -12794,6 +12794,8 @@ tools either included in speaq or available elsewhere 
on CRAN.")
                 "00jsmbkcwndm82aj6gc3qn0b48niajx8aymijy7cpq3vh6hlxpyr"))))
     (properties `((upstream-name . "Spectra")))
     (build-system r-build-system)
+    ;; FIXME Tests fail with: Error in mzR::openMSfile(x): File NA not found
+    (arguments (list #:tests? #false))
     (propagated-inputs (list r-biocgenerics
                              r-biocparallel
                              r-fs
@@ -12802,7 +12804,7 @@ tools either included in speaq or available elsewhere 
on CRAN.")
                              r-mscoreutils
                              r-protgenerics
                              r-s4vectors))
-    (native-inputs (list r-knitr r-testthat))
+    (native-inputs (list r-knitr r-mzr r-patrick r-testthat))
     (home-page "https://github.com/RforMassSpectrometry/Spectra";)
     (synopsis "Spectra infrastructure for mass spectrometry data")
     (description