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[PATCH 05/16] gnu: Add r-seqminer.
From: |
Ricardo Wurmus |
Subject: |
[PATCH 05/16] gnu: Add r-seqminer. |
Date: |
Tue, 17 Jan 2017 15:11:30 +0100 |
* gnu/packages/bioinformatics.scm (r-seqminer): New variable.
---
gnu/packages/bioinformatics.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index cd64d3439..28a0da80e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8149,3 +8149,25 @@ high-dimensional data like gene expression/RNA
sequencing/methylation/brain
imaging data that can be used in subsequent analyses to adjust for unknown,
unmodeled, or latent sources of noise.")
(license license:artistic2.0)))
+
+(define-public r-seqminer
+ (package
+ (name "r-seqminer")
+ (version "5.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "seqminer" version))
+ (sha256
+ (base32
+ "0y0gc5lws3hdxasjb84m532ics6imb7qg9sl1zy62h503jh4j9gw"))))
+ (build-system r-build-system)
+ (inputs
+ `(("zlib" ,zlib)))
+ (home-page "http://seqminer.genomic.codes")
+ (synopsis "Read nucleotide sequence data (VCF, BCF, and METAL formats)")
+ (description
+ "This package provides tools to integrate nucleotide sequencing
+data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.")
+ ;; Any version of the GPL is acceptable
+ (license (list license:gpl2+ license:gpl3+))))
--
2.11.0
- [PATCH 01/16] gnu: Add python-argparse., (continued)
- [PATCH 03/16] gnu: Add ribodiff., Ricardo Wurmus, 2017/01/17
- [PATCH 02/16] gnu: Add hisat2., Ricardo Wurmus, 2017/01/17
- [PATCH 04/16] gnu: Add r-compquadform., Ricardo Wurmus, 2017/01/17
- [PATCH 05/16] gnu: Add r-seqminer.,
Ricardo Wurmus <=
- [PATCH 07/16] gnu: Add r-maldiquant., Ricardo Wurmus, 2017/01/17
- [PATCH 06/16] gnu: Add r-raremetals2., Ricardo Wurmus, 2017/01/17
[PATCH 08/16] gnu: Add r-protgenerics., Ricardo Wurmus, 2017/01/17
[PATCH 09/16] gnu: Add r-mzr., Ricardo Wurmus, 2017/01/17
[PATCH 10/16] gnu: Add r-affyio., Ricardo Wurmus, 2017/01/17
[PATCH 11/16] gnu: Add r-affy., Ricardo Wurmus, 2017/01/17
[PATCH 13/16] gnu: Add r-mzid., Ricardo Wurmus, 2017/01/17