Re: [PATCH] Add r-scran 1.2.0 and all its dependencies

[Ra]

Dear Ricardo,

I try to satisfy all the requirements. What do you think ?

In attachment the patches. 

Shiny now is in web.scm

I reformat the description and fixed the synopsis. I also re checked the licenses.

I have created a single patch for each r-package.

--

Raoul

On Tue, Dec 27, 2016 at 6:06 PM Ra <address@hidden> wrote:

On Tue, Dec 27, 2016 at 6:00 PM Ricardo Wurmus <address@hidden> wrote:

Ra <address@hidden> writes:

> guix import cran --archive=bioconductor scater
>
> I had to add the missing dependencies by hand, is there a recursive way to do so?

Yes, you can just pass “--recursive” or “-r” and the importer will spit
out package expressions for all unpackaged dependencies.  A current
limitation is that it doesn’t cross over from Bioconductor to CRAN.

Nice, I will try

 

--
Ricardo

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http://elephly.net

0001-gnu-Add-r-vipor.patch
Description: Binary data

0004-gnu-Add-r-ggbeeswarm.patch
Description: Binary data

0002-gnu-Add-r-beeswarm.patch
Description: Binary data

0005-gnu-Add-r-statmod.patch
Description: Binary data

0006-gnu-Add-r-shiny.patch
Description: Binary data

0008-gnu-Add-r-tximport.patch
Description: Binary data

0007-gnu-Add-r-shinydashboard.patch
Description: Binary data

0003-gnu-Add-r-sourcetools.patch
Description: Binary data

0009-gnu-Add-r-rhdf5.patch
Description: Binary data

0011-gnu-Add-r-scran.patch
Description: Binary data

0010-gnu-Add-r-scater.patch
Description: Binary data