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Re: [igraph] Qcut algorithm?


From: Gang Su
Subject: Re: [igraph] Qcut algorithm?
Date: Wed, 19 May 2010 14:19:54 -0400
User-agent: Mozilla/5.0 (Windows; U; Windows NT 6.1; en-US; rv:1.9.1.9) Gecko/20100317 Thunderbird/3.0.4

Hi Gabor,

The authors used a two-step algorithm which includes 1. recursive partition. 2. refinement. The refinement part is independent of the community algorithm. And actually this scheme can be applied to any community algorithm which can work on disconnected graphs (also we can have a fix to let it work on connected graphs).

It gives smaller communities for larger networks.
Actually it's not very difficult to implement this 2-step procedure in R, but it won't be very efficient. So I was wondering actually instead of Q-cut, do you have a plan for implementation of such multi-step procedures. I can be very helpful because it's generic, and can actually work on any graph partitioning algorithm.

Gang

On 5/19/2010 4:56 AM, Gábor Csárdi wrote:
Hi Gang,

there are no such plans as far as I know, but I've added it to the wishlist:
https://bugs.launchpad.net/igraph/+bug/582712

This does not mean much, however.....

Best,
Gabor

On Tue, May 18, 2010 at 7:52 PM, Gang Su<address@hidden>  wrote:
Dear developers,

Just wonder whether igraph is planning to integrate the qcut algorithm?
Which is listed here:
http://www.ncbi.nlm.nih.gov/pubmed/18351912

Gang

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