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Re: [igraph] working with bipartite graphs


From: Gábor Csárdi
Subject: Re: [igraph] working with bipartite graphs
Date: Tue, 13 Aug 2013 09:21:01 -0400

Hi,

unfortunately getting only one projection is not supported. It was already requested before:
https://github.com/igraph/igraph/issues/307

I will code it up at some point, but probably not very soon. You can try modifying the C code of igraph, or just write the function for yourself, it is probably not very hard, and you could use graph.neighborhood to get the second neighbors of the type-1 nodes.

Gabor

On Tue, Aug 13, 2013 at 8:58 AM, MIKOLAJCZAK, Alexis <address@hidden> wrote:

Hi,

I'm also experiencing memory limitations on my pc for the projection of a bipartite network.

Is it possible to choose only one projection (in this case, the first one, hopefully the one I want to look at) ?

> bipartite.projection.size(g.bip, types = NULL)                                 
    
$vcount1
[1] 2492

$ecount1
[1] 803734

$vcount2
[1] 46857

$ecount2
[1] 377291985

Thank you for your answer.
Sincerly


--

Alexis MIKOLAJCZAK

Tél : 04.79.26.65.72

Conservatoire botanique national alpin

Siège : Domaine de Charance – 05000 Gap – Tél. 00 33 (0)4 92 53 56 82 – Fax. 00 33 (0)4 92 51 94 58

Antenne Alpes du nord / Ain : 148 rue Pasteur –73000 Chambéry – Tél. 00 00 33 (0)4 79 33 45 04

Site internet: http://cbn-alpin.fr/– Mail : address@hidden

SINP PACA : http://flore.silene.eu - SINP Rhône-Alpes : http://www.pifh.fr/




--

Alexis MIKOLAJCZAK

Tél : 04.79.26.65.72

Conservatoire botanique national alpin

Siège : Domaine de Charance – 05000 Gap – Tél. 00 33 (0)4 92 53 56 82 – Fax. 00 33 (0)4 92 51 94 58

Antenne Alpes du nord / Ain : 148 rue Pasteur –73000 Chambéry – Tél. 00 00 33 (0)4 79 33 45 04

Site internet: http://cbn-alpin.fr/– Mail : address@hidden

SINP PACA : http://flore.silene.eu - SINP Rhône-Alpes : http://www.pifh.fr/


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