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Re: [Swarm-Modelling] population genetics
From: |
Paul Johnson |
Subject: |
Re: [Swarm-Modelling] population genetics |
Date: |
Sun, 29 Oct 2006 14:29:53 -0600 |
User-agent: |
Thunderbird 1.5.0.7 (X11/20060913) |
I'd just like to know / see examples of models that read in detailed
data to initialize a simulation. Anybody got one besides the Anasazi
Village model??
pj
Scott Christley wrote:
Greetings,
Is anybody aware of research with an agent-based model (or other
modeling approaches) that simulates evolution (recombination/
mutation) on actual genomic data? I'm aware that genetic algorithms
often use an artificial genome with attributes encoded in artificial
genes, but I am looking for anybody who is using actual nucleotide
sequence. For example, a population genetics study may have
sequenced a number of alleles for an organism, then use those alleles
(and possible allele frequencies) to simulate and predict how
environmental changes could affect the population diversity. I am
able to find empirical studies which record allozyme diversity across
species, spatially, etc. but I have not found anybody doing
simulations with the actual genomic data.
thanks
Scott
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Paul E. Johnson email: address@hidden
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