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[ESPResSo] MPI run problem
|
From: |
İbrahim İnanç |
|
Subject: |
[ESPResSo] MPI run problem |
|
Date: |
Thu, 15 Oct 2009 16:21:48 +0300 |
|
User-agent: |
Thunderbird 2.0.0.6 (Windows/20070728) |
Hi,
I installed Espresso but I could not run the job on multiple cpus. The
error message is as below, I also attached config.log file..
The properties of my workstation are: HP DL580-G5 with 4x2.5 Ghz
(HCore), Linux(Centos 5.3) is installed..
I would be very happy if anybody can help me about this issue..
Note: There are those libraries installed many times but still they can
not be reached.
Thnaks very much.
ibrahim inanc
-bash-3.2$ /usr/local/espresso-2.1.2j/obj-Xeon_64-pc-linux/Espresso_bin:
error while loading shared libraries: liblamf77mpi.so.0: cannot open
shared object file: No such file or directory
/usr/local/espresso-2.1.2j/obj-Xeon_64-pc-linux/Espresso_bin: error
while loading shared libraries: liblamf77mpi.so.0: cannot open shared
object file: No such file or directory
/usr/local/espresso-2.1.2j/obj-Xeon_64-pc-linux/Espresso_bin: error
while loading shared libraries: liblamf77mpi.so.0: cannot open shared
object file: No such file or directory
/usr/local/espresso-2.1.2j/obj-Xeon_64-pc-linux/Espresso_bin: error
while loading shared libraries: liblamf77mpi.so.0: cannot open shared
object file: No such file or directory
-----------------------------------------------------------------------------
It seems that [at least] one of the processes that was started with
mpirun did not invoke MPI_INIT before quitting (it is possible that
more than one process did not invoke MPI_INIT -- mpirun was only
notified of the first one, which was on node n-2021449922).
mpirun can *only* be used with MPI programs (i.e., programs that
invoke MPI_INIT and MPI_FINALIZE). You can use the "lamexec" program
to run non-MPI programs over the lambooted nodes.
-----------------------------------------------------------------------------
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by ESPResSo configure-ac 2.1.2j, which was
generated by GNU Autoconf 2.61. Invocation command line was
$ ../configure-ac --enable-chooser --with-mpi=lam
## --------- ##
## Platform. ##
## --------- ##
hostname = dezyme.sabanciuniv.edu
uname -m = x86_64
uname -r = 2.6.18-128.4.1.el5
uname -s = Linux
uname -v = #1 SMP Tue Aug 4 20:19:25 EDT 2009
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = x86_64
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /usr/kerberos/sbin
PATH: /usr/kerberos/bin
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /sbin
PATH: /bin
PATH: /usr/sbin
PATH: /usr/bin
PATH: /root/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure-ac:1862: checking build system type
configure-ac:1880: result: Xeon_64-pc-linux
configure-ac:1902: checking host system type
configure-ac:1917: result: Xeon_64-pc-linux
configure-ac:1939: checking target system type
configure-ac:1954: result: Xeon_64-pc-linux
configure-ac:1999: checking for a BSD-compatible install
configure-ac:2055: result: /usr/bin/install -c
configure-ac:2066: checking whether build environment is sane
configure-ac:2109: result: yes
configure-ac:2137: checking for a thread-safe mkdir -p
configure-ac:2176: result: /bin/mkdir -p
configure-ac:2189: checking for gawk
configure-ac:2205: found /bin/gawk
configure-ac:2216: result: gawk
configure-ac:2227: checking whether make sets $(MAKE)
configure-ac:2248: result: yes
configure-ac:2436: checking whether to enable maintainer-specific portions of
Makefiles
configure-ac:2445: result: no
configure-ac:2482: checking for style of include used by make
configure-ac:2510: result: GNU
configure-ac:2580: checking for gcc
configure-ac:2596: found /usr/bin/gcc
configure-ac:2607: result: gcc
configure-ac:2845: checking for C compiler version
configure-ac:2852: gcc --version >&5
gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-44)
Copyright (C) 2006 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure-ac:2855: $? = 0
configure-ac:2862: gcc -v >&5
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man
--infodir=/usr/share/info --enable-shared --enable-threads=posix
--enable-checking=release --with-system-zlib --enable-__cxa_atexit
--disable-libunwind-exceptions --enable-libgcj-multifile
--enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk
--disable-dssi --enable-plugin
--with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic
--host=x86_64-redhat-linux
Thread model: posix
gcc version 4.1.2 20080704 (Red Hat 4.1.2-44)
configure-ac:2865: $? = 0
configure-ac:2872: gcc -V >&5
gcc: '-V' option must have argument
configure-ac:2875: $? = 1
configure-ac:2898: checking for C compiler default output file name
configure-ac:2925: gcc conftest.c >&5
configure-ac:2928: $? = 0
configure-ac:2966: result: a.out
configure-ac:2983: checking whether the C compiler works
configure-ac:2993: ./a.out
configure-ac:2996: $? = 0
configure-ac:3013: result: yes
configure-ac:3020: checking whether we are cross compiling
configure-ac:3022: result: no
configure-ac:3025: checking for suffix of executables
configure-ac:3032: gcc -o conftest conftest.c >&5
configure-ac:3035: $? = 0
configure-ac:3059: result:
configure-ac:3065: checking for suffix of object files
configure-ac:3091: gcc -c conftest.c >&5
configure-ac:3094: $? = 0
configure-ac:3117: result: o
configure-ac:3121: checking whether we are using the GNU C compiler
configure-ac:3150: gcc -c conftest.c >&5
configure-ac:3156: $? = 0
configure-ac:3173: result: yes
configure-ac:3177: checking for gcc option to accept ISO C89
configure-ac:3251: gcc -c conftest.c >&5
configure-ac:3257: $? = 0
configure-ac:3280: result: none needed
configure-ac:3300: checking dependency style of gcc
configure-ac:3391: result: gcc3
configure-ac:3411: checking how to run the C preprocessor
configure-ac:3451: gcc -E conftest.c
configure-ac:3457: $? = 0
configure-ac:3488: gcc -E conftest.c
conftest.c:10:28: error: ac_nonexistent.h: No such file or directory
configure-ac:3494: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure-ac:3527: result: gcc -E
configure-ac:3556: gcc -E conftest.c
configure-ac:3562: $? = 0
configure-ac:3593: gcc -E conftest.c
conftest.c:10:28: error: ac_nonexistent.h: No such file or directory
configure-ac:3599: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure-ac:3684: checking for gcc
configure-ac:3711: result: gcc
configure-ac:3949: checking for C compiler version
configure-ac:3956: gcc --version >&5
gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-44)
Copyright (C) 2006 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure-ac:3959: $? = 0
configure-ac:3966: gcc -v >&5
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man
--infodir=/usr/share/info --enable-shared --enable-threads=posix
--enable-checking=release --with-system-zlib --enable-__cxa_atexit
--disable-libunwind-exceptions --enable-libgcj-multifile
--enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk
--disable-dssi --enable-plugin
--with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic
--host=x86_64-redhat-linux
Thread model: posix
gcc version 4.1.2 20080704 (Red Hat 4.1.2-44)
configure-ac:3969: $? = 0
configure-ac:3976: gcc -V >&5
gcc: '-V' option must have argument
configure-ac:3979: $? = 1
configure-ac:3982: checking whether we are using the GNU C compiler
configure-ac:4034: result: yes
configure-ac:4038: checking for gcc option to accept ISO C89
configure-ac:4141: result: none needed
configure-ac:4161: checking dependency style of gcc
configure-ac:4252: result: gcc3
configure-ac:4268: checking whether gcc and cc understand -c and -o together
configure-ac:4303: gcc -c conftest.c -o conftest2.o >&5
configure-ac:4306: $? = 0
configure-ac:4312: gcc -c conftest.c -o conftest2.o >&5
configure-ac:4315: $? = 0
configure-ac:4326: cc -c conftest.c >&5
configure-ac:4329: $? = 0
configure-ac:4337: cc -c conftest.c -o conftest2.o >&5
configure-ac:4340: $? = 0
configure-ac:4346: cc -c conftest.c -o conftest2.o >&5
configure-ac:4349: $? = 0
configure-ac:4367: result: yes
configure-ac:7420: checking for mpcc
configure-ac:7450: result: no
configure-ac:7420: checking for mpxlc
configure-ac:7450: result: no
configure-ac:7420: checking for mpicc
configure-ac:7436: found /usr/local/bin/mpicc
configure-ac:7447: result: mpicc
configure-ac:7460: checking whether the mpicc command works out of the box for
MPI
configure-ac:7513: mpicc -o conftest conftest.c >&5
configure-ac:7519: $? = 0
configure-ac:7525: result: yes
configure-ac:7539: trying to find a LAM environment
configure-ac:7745: checking for mpirun
configure-ac:7764: found /usr/local/bin/mpirun
configure-ac:7777: result: /usr/local/bin/mpirun
configure-ac:7800: found a working LAM environment
configure-ac:8174: checking how to inline functions
configure-ac:8201: mpicc -c conftest.c >&5
configure-ac:8207: $? = 0
configure-ac:8228: result: static inline
configure-ac:8257: checking the compiler type
configure-ac:8288: result: gcc
configure-ac:8329: checking whether the compiler accepts -fast
configure-ac:8354: mpicc -c -fast conftest.c >&5
cc1: error: unrecognized command line option "-fast"
mpicc: No such file or directory
configure-ac:8360: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| /* end confdefs.h. */
|
| int
| main ()
| {
|
| ;
| return 0;
| }
configure-ac:8371: result: no
configure-ac:8389: checking whether the compiler accepts -m64
configure-ac:8414: mpicc -c -m64 conftest.c >&5
configure-ac:8420: $? = 0
configure-ac:8425: result: yes
configure-ac:8443: checking whether the compiler accepts -march=noconamo
configure-ac:8468: mpicc -c -march=noconamo -m64 conftest.c >&5
conftest.c:1: error: bad value (noconamo) for -march= switch
conftest.c:1: error: bad value (noconamo) for -mtune= switch
mpicc: No such file or directory
configure-ac:8474: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| /* end confdefs.h. */
|
| int
| main ()
| {
|
| ;
| return 0;
| }
configure-ac:8485: result: no
configure-ac:8663: checking whether the compiler accepts -msse2 -mfpmath=sse
configure-ac:8688: mpicc -c -msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:8694: $? = 0
configure-ac:8699: result: yes
configure-ac:8717: checking whether the compiler accepts -malign-double
configure-ac:8742: mpicc -c -malign-double -msse2 -mfpmath=sse -m64
conftest.c >&5
conftest.c:1: error: -malign-double makes no sense in the 64bit mode
mpicc: No such file or directory
configure-ac:8748: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| /* end confdefs.h. */
|
| int
| main ()
| {
|
| ;
| return 0;
| }
configure-ac:8759: result: no
configure-ac:8774: checking whether the compiler accepts -O3
configure-ac:8799: mpicc -c -O3 -msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:8805: $? = 0
configure-ac:8810: result: yes
configure-ac:8826: checking whether the compiler accepts -Wno-unused-function
configure-ac:8851: mpicc -c -Wno-unused-function -O3 -msse2 -mfpmath=sse -m64
conftest.c >&5
configure-ac:8857: $? = 0
configure-ac:8862: result: yes
configure-ac:8878: checking whether the compiler accepts -Wall
configure-ac:8903: mpicc -c -Wall -Wno-unused-function -O3 -msse2 -mfpmath=sse
-m64 conftest.c >&5
configure-ac:8909: $? = 0
configure-ac:8914: result: yes
configure-ac:8930: checking whether the compiler accepts -ffast-math
configure-ac:8955: mpicc -c -ffast-math -Wall -Wno-unused-function -O3 -msse2
-mfpmath=sse -m64 conftest.c >&5
configure-ac:8961: $? = 0
configure-ac:8966: result: yes
configure-ac:8982: checking whether the compiler accepts -floop-optimize
configure-ac:9007: mpicc -c -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:9013: $? = 0
configure-ac:9018: result: yes
configure-ac:9034: checking whether the compiler accepts -funroll-loops
configure-ac:9059: mpicc -c -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:9065: $? = 0
configure-ac:9070: result: yes
configure-ac:9141: checking whether the compiler accepts -fomit-frame-pointer
configure-ac:9166: mpicc -c -fomit-frame-pointer -funroll-loops -floop-optimize
-ffast-math -Wall -Wno-unused-function -O3 -msse2 -mfpmath=sse -m64
conftest.c >&5
configure-ac:9172: $? = 0
configure-ac:9177: result: yes
configure-ac:9303: checking whether the compiler accepts -finline-limit=1000000
configure-ac:9328: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:9334: $? = 0
configure-ac:9339: result: yes
configure-ac:11130: checking for gawk
configure-ac:11157: result: gawk
configure-ac:11168: checking for grep that handles long lines and -e
configure-ac:11242: result: /bin/grep
configure-ac:11247: checking for egrep
configure-ac:11325: result: /bin/grep -E
configure-ac:11373: checking for ranlib
configure-ac:11389: found /usr/bin/ranlib
configure-ac:11400: result: ranlib
configure-ac:11439: checking for a BSD-compatible install
configure-ac:11495: result: /usr/bin/install -c
configure-ac:11506: checking whether ln -s works
configure-ac:11510: result: yes
configure-ac:11519: checking for doxygen
configure-ac:11537: found /usr/bin/doxygen
configure-ac:11550: result: /usr/bin/doxygen
configure-ac:11568: checking for pdflatex
configure-ac:11586: found /usr/bin/pdflatex
configure-ac:11599: result: /usr/bin/pdflatex
configure-ac:11609: checking for makeindex
configure-ac:11627: found /usr/bin/makeindex
configure-ac:11640: result: /usr/bin/makeindex
configure-ac:11650: checking for bibtex
configure-ac:11668: found /usr/bin/bibtex
configure-ac:11681: result: /usr/bin/bibtex
configure-ac:11862: checking for libtcl8.5
configure-ac:11896: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -ltcl8.5 >&5
/usr/bin/ld: cannot find -ltcl8.5
collect2: ld returned 1 exit status
mpicc: No such file or directory
configure-ac:11902: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char Tcl_Init ();
| int
| main ()
| {
| return Tcl_Init ();
| ;
| return 0;
| }
configure-ac:11950: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 -L/sw/lib conftest.c
-ltcl8.5 >&5
/usr/bin/ld: cannot find -ltcl8.5
collect2: ld returned 1 exit status
mpicc: No such file or directory
configure-ac:11956: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char Tcl_Init ();
| int
| main ()
| {
| return Tcl_Init ();
| ;
| return 0;
| }
configure-ac:11950: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 -L/usr/lib64 conftest.c
-ltcl8.5 >&5
/usr/bin/ld: cannot find -ltcl8.5
collect2: ld returned 1 exit status
mpicc: No such file or directory
configure-ac:11956: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char Tcl_Init ();
| int
| main ()
| {
| return Tcl_Init ();
| ;
| return 0;
| }
configure-ac:11950: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 -L/usr/local/lib64
conftest.c -ltcl8.5 >&5
/usr/bin/ld: cannot find -ltcl8.5
collect2: ld returned 1 exit status
mpicc: No such file or directory
configure-ac:11956: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char Tcl_Init ();
| int
| main ()
| {
| return Tcl_Init ();
| ;
| return 0;
| }
configure-ac:11950: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 -L/opt/lib64 conftest.c
-ltcl8.5 >&5
/usr/bin/ld: cannot find -ltcl8.5
collect2: ld returned 1 exit status
mpicc: No such file or directory
configure-ac:11956: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char Tcl_Init ();
| int
| main ()
| {
| return Tcl_Init ();
| ;
| return 0;
| }
configure-ac:11950: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 -L/usr/lib conftest.c
-ltcl8.5 >&5
/usr/bin/ld: cannot find -ltcl8.5
collect2: ld returned 1 exit status
mpicc: No such file or directory
configure-ac:11956: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char Tcl_Init ();
| int
| main ()
| {
| return Tcl_Init ();
| ;
| return 0;
| }
configure-ac:11950: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 -L/usr/local/lib
conftest.c -ltcl8.5 >&5
/usr/bin/ld: cannot find -ltcl8.5
collect2: ld returned 1 exit status
mpicc: No such file or directory
configure-ac:11956: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char Tcl_Init ();
| int
| main ()
| {
| return Tcl_Init ();
| ;
| return 0;
| }
configure-ac:11950: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 -L/opt/lib conftest.c
-ltcl8.5 >&5
/usr/bin/ld: cannot find -ltcl8.5
collect2: ld returned 1 exit status
mpicc: No such file or directory
configure-ac:11956: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char Tcl_Init ();
| int
| main ()
| {
| return Tcl_Init ();
| ;
| return 0;
| }
configure-ac:11979: result: no
configure-ac:11862: checking for libtcl8.4
configure-ac:11896: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -ltcl8.4 >&5
configure-ac:11902: $? = 0
configure-ac:11976: result: yes
configure-ac:12168: checking for tcl.h
configure-ac:12183: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:12189: $? = 0
configure-ac:12242: result: yes
configure-ac:12278: checking for X
configure-ac:12393: gcc -E conftest.c
configure-ac:12399: $? = 0
configure-ac:12448: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lX11 -ltcl8.4
>&5
configure-ac:12454: $? = 0
configure-ac:12513: result: libraries , headers
configure-ac:14107: checking for libfftw3
configure-ac:14141: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:14147: $? = 0
configure-ac:14221: result: yes
configure-ac:14238: checking for fftw3.h
configure-ac:14253: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:14259: $? = 0
configure-ac:14312: result: yes
configure-ac:15401: checking for ANSI C header files
configure-ac:15431: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15437: $? = 0
configure-ac:15536: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:15539: $? = 0
configure-ac:15545: ./conftest
./conftest: error while loading shared libraries: liblamf77mpi.so.0: cannot
open shared object file: No such file or directory
configure-ac:15548: $? = 127
configure-ac: program exited with status 127
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| #define FFTW 3
| /* end confdefs.h. */
| #include <ctype.h>
| #include <stdlib.h>
| #if ((' ' & 0x0FF) == 0x020)
| # define ISLOWER(c) ('a' <= (c) && (c) <= 'z')
| # define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c))
| #else
| # define ISLOWER(c) (('a' <= (c) && (c) <= 'i') ||
('j' <= (c) && (c) <= 'r') || ('s' <= (c) && (c) <= 'z'))
| # define TOUPPER(c) (ISLOWER(c) ? ((c) | 0x40) : (c))
| #endif
|
| #define XOR(e, f) (((e) && !(f)) || (!(e) && (f)))
| int
| main ()
| {
| int i;
| for (i = 0; i < 256; i++)
| if (XOR (islower (i), ISLOWER (i))
| || toupper (i) != TOUPPER (i))
| return 2;
| return 0;
| }
configure-ac:15565: result: no
configure-ac:15589: checking for sys/types.h
configure-ac:15610: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15616: $? = 0
configure-ac:15632: result: yes
configure-ac:15589: checking for sys/stat.h
configure-ac:15610: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15616: $? = 0
configure-ac:15632: result: yes
configure-ac:15589: checking for stdlib.h
configure-ac:15610: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15616: $? = 0
configure-ac:15632: result: yes
configure-ac:15589: checking for string.h
configure-ac:15610: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15616: $? = 0
configure-ac:15632: result: yes
configure-ac:15589: checking for memory.h
configure-ac:15610: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15616: $? = 0
configure-ac:15632: result: yes
configure-ac:15589: checking for strings.h
configure-ac:15610: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15616: $? = 0
configure-ac:15632: result: yes
configure-ac:15589: checking for inttypes.h
configure-ac:15610: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15616: $? = 0
configure-ac:15632: result: yes
configure-ac:15589: checking for stdint.h
configure-ac:15610: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15616: $? = 0
configure-ac:15632: result: yes
configure-ac:15589: checking for unistd.h
configure-ac:15610: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15616: $? = 0
configure-ac:15632: result: yes
configure-ac:15675: checking arpa/inet.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking arpa/inet.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for arpa/inet.h
configure-ac:15792: result: yes
configure-ac:15675: checking fcntl.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking fcntl.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for fcntl.h
configure-ac:15792: result: yes
configure-ac:15675: checking float.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking float.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for float.h
configure-ac:15792: result: yes
configure-ac:15665: checking for inttypes.h
configure-ac:15671: result: yes
configure-ac:15675: checking limits.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking limits.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for limits.h
configure-ac:15792: result: yes
configure-ac:15675: checking netdb.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking netdb.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for netdb.h
configure-ac:15792: result: yes
configure-ac:15675: checking netinet/in.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking netinet/in.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for netinet/in.h
configure-ac:15792: result: yes
configure-ac:15675: checking stddef.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking stddef.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for stddef.h
configure-ac:15792: result: yes
configure-ac:15665: checking for stdlib.h
configure-ac:15671: result: yes
configure-ac:15665: checking for string.h
configure-ac:15671: result: yes
configure-ac:15665: checking for strings.h
configure-ac:15671: result: yes
configure-ac:15675: checking sys/file.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking sys/file.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for sys/file.h
configure-ac:15792: result: yes
configure-ac:15675: checking sys/socket.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking sys/socket.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for sys/socket.h
configure-ac:15792: result: yes
configure-ac:15675: checking sys/time.h usability
configure-ac:15692: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15698: $? = 0
configure-ac:15712: result: yes
configure-ac:15716: checking sys/time.h presence
configure-ac:15731: gcc -E conftest.c
configure-ac:15737: $? = 0
configure-ac:15751: result: yes
configure-ac:15784: checking for sys/time.h
configure-ac:15792: result: yes
configure-ac:15665: checking for unistd.h
configure-ac:15671: result: yes
configure-ac:15807: checking for an ANSI C-conforming const
configure-ac:15882: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
conftest.c: In function 'main':
conftest.c:67: warning: 't' is used uninitialized in this function
conftest.c:83: warning: 'b' is used uninitialized in this function
conftest.c:89: warning: 'cs[0]' is used uninitialized in this function
configure-ac:15888: $? = 0
configure-ac:15903: result: yes
configure-ac:15913: checking whether time.h and sys/time.h may both be included
configure-ac:15943: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:15949: $? = 0
configure-ac:15964: result: yes
configure-ac:15981: checking for stdlib.h
configure-ac:15987: result: yes
configure-ac:16121: checking for GNU libc compatible malloc
configure-ac:16155: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:16158: $? = 0
configure-ac:16164: ./conftest
./conftest: error while loading shared libraries: liblamf77mpi.so.0: cannot
open shared object file: No such file or directory
configure-ac:16167: $? = 127
configure-ac: program exited with status 127
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| #define FFTW 3
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_FLOAT_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STDLIB_H 1
| /* end confdefs.h. */
| #if defined STDC_HEADERS || defined HAVE_STDLIB_H
| # include <stdlib.h>
| #else
| char *malloc ();
| #endif
|
| int
| main ()
| {
| return ! malloc (0);
| ;
| return 0;
| }
configure-ac:16183: result: no
configure-ac:16211: checking for working memcmp
configure-ac:16264: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:16267: $? = 0
configure-ac:16273: ./conftest
./conftest: error while loading shared libraries: liblamf77mpi.so.0: cannot
open shared object file: No such file or directory
configure-ac:16276: $? = 127
configure-ac: program exited with status 127
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| #define FFTW 3
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_FLOAT_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STDLIB_H 1
| #define HAVE_MALLOC 0
| #define malloc rpl_malloc
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
|
| /* Some versions of memcmp are not 8-bit clean. */
| char c0 = '\100', c1 = '\200', c2 = '\201';
| if (memcmp(&c0, &c2, 1) >= 0 || memcmp(&c1, &c2, 1) >= 0)
| return 1;
|
| /* The Next x86 OpenStep bug shows up only when comparing 16 bytes
| or more and with at least one buffer not starting on a 4-byte boundary.
| William Lewis provided this test program. */
| {
| char foo[21];
| char bar[21];
| int i;
| for (i = 0; i < 4; i++)
| {
| char *a = foo + i;
| char *b = bar + i;
| strcpy (a, "--------01111111");
| strcpy (b, "--------10000000");
| if (memcmp (a, b, 16) >= 0)
| return 1;
| }
| return 0;
| }
|
| ;
| return 0;
| }
configure-ac:16292: result: no
configure-ac:16306: checking for stdlib.h
configure-ac:16312: result: yes
configure-ac:16446: checking for GNU libc compatible realloc
configure-ac:16480: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:16483: $? = 0
configure-ac:16489: ./conftest
./conftest: error while loading shared libraries: liblamf77mpi.so.0: cannot
open shared object file: No such file or directory
configure-ac:16492: $? = 127
configure-ac: program exited with status 127
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| #define FFTW 3
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_FLOAT_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STDLIB_H 1
| #define HAVE_MALLOC 0
| #define malloc rpl_malloc
| #define HAVE_STDLIB_H 1
| /* end confdefs.h. */
| #if defined STDC_HEADERS || defined HAVE_STDLIB_H
| # include <stdlib.h>
| #else
| char *realloc ();
| #endif
|
| int
| main ()
| {
| return ! realloc (0, 0);
| ;
| return 0;
| }
configure-ac:16508: result: no
configure-ac:16552: checking sys/select.h usability
configure-ac:16569: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:16575: $? = 0
configure-ac:16589: result: yes
configure-ac:16593: checking sys/select.h presence
configure-ac:16608: gcc -E conftest.c
configure-ac:16614: $? = 0
configure-ac:16628: result: yes
configure-ac:16661: checking for sys/select.h
configure-ac:16669: result: yes
configure-ac:16542: checking for sys/socket.h
configure-ac:16548: result: yes
configure-ac:16682: checking types of arguments for select
configure-ac:16720: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:16726: $? = 0
configure-ac:16747: result: int,fd_set *,struct timeval *
configure-ac:16770: checking return type of signal handlers
configure-ac:16798: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
conftest.c: In function 'main':
conftest.c:56: error: void value not ignored as it ought to be
mpicc: No such file or directory
configure-ac:16804: $? = 1
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| #define FFTW 3
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_FLOAT_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STDLIB_H 1
| #define HAVE_MALLOC 0
| #define malloc rpl_malloc
| #define HAVE_STDLIB_H 1
| #define HAVE_REALLOC 0
| #define realloc rpl_realloc
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define SELECT_TYPE_ARG1 int
| #define SELECT_TYPE_ARG234 (fd_set *)
| #define SELECT_TYPE_ARG5 (struct timeval *)
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <signal.h>
|
| int
| main ()
| {
| return *(signal (0, 0)) (0) == 1;
| ;
| return 0;
| }
configure-ac:16819: result: void
configure-ac:16827: checking for size_t
configure-ac:16857: mpicc -c -finline-limit=1000000 -fomit-frame-pointer
-funroll-loops -floop-optimize -ffast-math -Wall -Wno-unused-function -O3
-msse2 -mfpmath=sse -m64 conftest.c >&5
configure-ac:16863: $? = 0
configure-ac:16878: result: yes
configure-ac:16890: checking for working strtod
configure-ac:16941: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:16944: $? = 0
configure-ac:16950: ./conftest
./conftest: error while loading shared libraries: liblamf77mpi.so.0: cannot
open shared object file: No such file or directory
configure-ac:16953: $? = 127
configure-ac: program exited with status 127
configure-ac: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "ESPResSo"
| #define PACKAGE_TARNAME "espresso"
| #define PACKAGE_VERSION "2.1.2j"
| #define PACKAGE_STRING "ESPResSo 2.1.2j"
| #define PACKAGE_BUGREPORT "address@hidden"
| #define PACKAGE "espresso"
| #define VERSION "2.1.2j"
| #define MPI "lam"
| #define MDINLINE static inline
| #define USE_NON_CONST 1
| #define FFTW 3
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_FLOAT_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_STDDEF_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_FILE_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_UNISTD_H 1
| #define TIME_WITH_SYS_TIME 1
| #define HAVE_STDLIB_H 1
| #define HAVE_MALLOC 0
| #define malloc rpl_malloc
| #define HAVE_STDLIB_H 1
| #define HAVE_REALLOC 0
| #define realloc rpl_realloc
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define SELECT_TYPE_ARG1 int
| #define SELECT_TYPE_ARG234 (fd_set *)
| #define SELECT_TYPE_ARG5 (struct timeval *)
| #define RETSIGTYPE void
| /* end confdefs.h. */
|
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #ifndef strtod
| double strtod ();
| #endif
| int
| main()
| {
| {
| /* Some versions of Linux strtod mis-parse strings with leading '+'. */
| char *string = " +69";
| char *term;
| double value;
| value = strtod (string, &term);
| if (value != 69 || term != (string + 4))
| return 1;
| }
|
| {
| /* Under Solaris 2.4, strtod returns the wrong value for the
| terminating character under some conditions. */
| char *string = "NaN";
| char *term;
| strtod (string, &term);
| if (term != string && *(term - 1) == 0)
| return 1;
| }
| return 0;
| }
|
configure-ac:16969: result: no
configure-ac:16978: checking for pow
configure-ac:17034: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
conftest.c:74: warning: conflicting types for built-in function 'pow'
configure-ac:17040: $? = 0
configure-ac:17057: result: yes
configure-ac:17146: checking for atexit
configure-ac:17202: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:17208: $? = 0
configure-ac:17226: result: yes
configure-ac:17146: checking for floor
configure-ac:17202: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
conftest.c:75: warning: conflicting types for built-in function 'floor'
configure-ac:17208: $? = 0
configure-ac:17226: result: yes
configure-ac:17146: checking for getcwd
configure-ac:17202: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:17208: $? = 0
configure-ac:17226: result: yes
configure-ac:17146: checking for gethostbyname
configure-ac:17202: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:17208: $? = 0
configure-ac:17226: result: yes
configure-ac:17146: checking for memset
configure-ac:17202: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
conftest.c:78: warning: conflicting types for built-in function 'memset'
configure-ac:17208: $? = 0
configure-ac:17226: result: yes
configure-ac:17146: checking for pow
configure-ac:17226: result: yes
configure-ac:17146: checking for rint
configure-ac:17202: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
conftest.c:80: warning: conflicting types for built-in function 'rint'
configure-ac:17208: $? = 0
configure-ac:17226: result: yes
configure-ac:17146: checking for select
configure-ac:17202: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:17208: $? = 0
configure-ac:17226: result: yes
configure-ac:17146: checking for socket
configure-ac:17202: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
configure-ac:17208: $? = 0
configure-ac:17226: result: yes
configure-ac:17146: checking for sqrt
configure-ac:17202: mpicc -o conftest -finline-limit=1000000
-fomit-frame-pointer -funroll-loops -floop-optimize -ffast-math -Wall
-Wno-unused-function -O3 -msse2 -mfpmath=sse -m64 conftest.c -lfftw3
-ltcl8.4 -lm >&5
conftest.c:83: warning: conflicting types for built-in function 'sqrt'
configure-ac:17208: $? = 0
configure-ac:17226: result: yes
configure-ac:17251: checking whether to enable the chooser
configure-ac:17254: result: yes
configure-ac:17284: checking the name of the configuration header
configure-ac:17287: result: myconfig.h
configure-ac:17471: creating ./config.status
## ---------------------- ##
## Running config.status. ##
## ---------------------- ##
This file was extended by ESPResSo config.status 2.1.2j, which was
generated by GNU Autoconf 2.61. Invocation command line was
CONFIG_FILES =
CONFIG_HEADERS =
CONFIG_LINKS =
CONFIG_COMMANDS =
$ ./config.status
on dezyme.sabanciuniv.edu
config.status:705: creating Makefile-am
config.status:705: creating scripts/Makefile
config.status:705: creating testsuite/Makefile
config.status:705: creating doc/Makefile
config.status:705: creating doc/dg/Makefile
config.status:705: creating doc/ug/Makefile
config.status:705: creating doc/ug/figures/Makefile
config.status:705: creating doc/maggs_doc/Makefile
config.status:705: creating doc/tutorials/Makefile
config.status:705: creating doc/tutorials/tut2/Makefile
config.status:705: creating doc/tutorials/tut2/figures/Makefile
config.status:705: creating config/myconfig.h
config.status:705: creating chooser/Espresso
config.status:705: creating mpiwrap/Espresso
config.status:705: creating testsuite/test.sh
config.status:705: creating Espresso
config.status:705: creating acconfig.h
config.status:974: acconfig.h is unchanged
config.status:1024: linking ../Makefile to Makefile
config.status:1046: executing depfiles commands
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=Xeon_64-pc-linux
ac_cv_c_compiler_gnu=yes
ac_cv_c_const=yes
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_XMKMF_set=
ac_cv_env_XMKMF_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_func_atexit=yes
ac_cv_func_floor=yes
ac_cv_func_getcwd=yes
ac_cv_func_gethostbyname=yes
ac_cv_func_malloc_0_nonnull=no
ac_cv_func_memcmp_working=no
ac_cv_func_memset=yes
ac_cv_func_pow=yes
ac_cv_func_realloc_0_nonnull=no
ac_cv_func_rint=yes
ac_cv_func_select=yes
ac_cv_func_select_args='int,fd_set *,struct timeval *'
ac_cv_func_socket=yes
ac_cv_func_sqrt=yes
ac_cv_func_strtod=no
ac_cv_have_x='have_x=yes ac_x_includes='\'''\'' ac_x_libraries='\'''\'''
ac_cv_header_arpa_inet_h=yes
ac_cv_header_fcntl_h=yes
ac_cv_header_float_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_limits_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_netdb_h=yes
ac_cv_header_netinet_in_h=yes
ac_cv_header_stdc=no
ac_cv_header_stddef_h=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_file_h=yes
ac_cv_header_sys_select_h=yes
ac_cv_header_sys_socket_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_time_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_time=yes
ac_cv_header_unistd_h=yes
ac_cv_host=Xeon_64-pc-linux
ac_cv_objext=o
ac_cv_path_BIBTEX=/usr/bin/bibtex
ac_cv_path_DOXYGEN=/usr/bin/doxygen
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_GREP=/bin/grep
ac_cv_path_MAKEINDEX=/usr/bin/makeindex
ac_cv_path_PDFLATEX=/usr/bin/pdflatex
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_lam_bin=/usr/local/bin/mpirun
ac_cv_path_mkdir=/bin/mkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_MPICC=mpicc
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_cc_c89=
ac_cv_prog_cc_gcc_c_o=yes
ac_cv_prog_make_make_set=yes
ac_cv_target=Xeon_64-pc-linux
ac_cv_type_signal=void
ac_cv_type_size_t=yes
am_cv_CC_dependencies_compiler_type=gcc3
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='${SHELL} /usr/local/espresso-2.1.2j/config/missing --run aclocal-1.10'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='${SHELL} /usr/local/espresso-2.1.2j/config/missing --run tar'
AUTOCONF='${SHELL} /usr/local/espresso-2.1.2j/config/missing --run autoconf'
AUTOHEADER='${SHELL} /usr/local/espresso-2.1.2j/config/missing --run autoheader'
AUTOMAKE='${SHELL} /usr/local/espresso-2.1.2j/config/missing --run
automake-1.10'
AWK='gawk'
BIBTEX='/usr/bin/bibtex'
CC='mpicc'
CCDEPMODE='depmode=gcc3'
CFLAGS='-finline-limit=1000000 -fomit-frame-pointer -funroll-loops
-floop-optimize -ffast-math -Wall -Wno-unused-function -O3 -msse2 -mfpmath=sse
-m64 '
CONFIGURE_DEPENDENCIES='$(top_srcdir)/RELEASE_NOTES'
CPP='gcc -E'
CPPFLAGS=''
CYGPATH_W='echo'
DEFS='-DHAVE_CONFIG_H'
DEPDIR='.deps'
DOXYGEN='/usr/bin/doxygen'
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
EXEEXT=''
GREP='/bin/grep'
HAVE_DOXYGEN_FALSE='#'
HAVE_DOXYGEN_TRUE=''
HAVE_LATEX_FALSE='#'
HAVE_LATEX_TRUE=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LDFLAGS=''
LIBOBJS=' ${LIBOBJDIR}malloc$U.o ${LIBOBJDIR}memcmp$U.o ${LIBOBJDIR}realloc$U.o
${LIBOBJDIR}strtod$U.o'
LIBS='-lfftw3 -ltcl8.4 -lm '
LN_S='ln -s'
LTLIBOBJS=' ${LIBOBJDIR}malloc$U.lo ${LIBOBJDIR}memcmp$U.lo
${LIBOBJDIR}realloc$U.lo ${LIBOBJDIR}strtod$U.lo'
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINDEX='/usr/bin/makeindex'
MAKEINFO='${SHELL} /usr/local/espresso-2.1.2j/config/missing --run makeinfo'
MPICC='mpicc'
MPI_FAKE_FALSE=''
MPI_FAKE_TRUE='#'
MPI_INVOCATION='/usr/local/bin/mpirun -x ESPRESSO_SCRIPTS -np $NP -nsigs
$ESPRESSO_CALL'
OBJEXT='o'
PACKAGE='espresso'
PACKAGE_BUGREPORT='address@hidden'
PACKAGE_NAME='ESPResSo'
PACKAGE_STRING='ESPResSo 2.1.2j'
PACKAGE_TARNAME='espresso'
PACKAGE_VERSION='2.1.2j'
PATH_SEPARATOR=':'
PDFLATEX='/usr/bin/pdflatex'
POW_LIB=''
RANLIB='ranlib'
SET_MAKE=''
SHELL='/bin/sh'
STRIP=''
USE_CHOOSER_FALSE='#'
USE_CHOOSER_TRUE=''
VERSION='2.1.2j'
XMKMF=''
X_CFLAGS=''
X_EXTRA_LIBS=''
X_LIBS=''
X_PRE_LIBS=''
ac_ct_CC='gcc'
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__include='include'
am__isrc=' -I$(srcdir)'
am__leading_dot='.'
am__quote=''
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
bindir='${exec_prefix}/bin'
build='Xeon_64-pc-linux'
build_alias=''
build_cpu='Xeon_64'
build_os='linux'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
dmpi_bin=''
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='${prefix}'
execpkglibdir='${pkglibdir}/obj-Xeon_64-pc-linux'
generic_bin=''
host='Xeon_64-pc-linux'
host_alias=''
host_cpu='Xeon_64'
host_os='linux'
host_vendor='pc'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='$(SHELL) /usr/local/espresso-2.1.2j/config/install-sh'
lam_bin='/usr/local/bin/mpirun'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='/bin/mkdir -p'
mpich_bin=''
myconfig='myconfig.h'
oldincludedir='/usr/include'
pdfdir='${docdir}'
poe_bin=''
prefix='/root/Espresso'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
scriptsdir='${pkglibdir}/scripts'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target='Xeon_64-pc-linux'
target_alias=''
target_cpu='Xeon_64'
target_os='linux'
target_vendor='pc'
## ----------- ##
## confdefs.h. ##
## ----------- ##
#define PACKAGE_NAME "ESPResSo"
#define PACKAGE_TARNAME "espresso"
#define PACKAGE_VERSION "2.1.2j"
#define PACKAGE_STRING "ESPResSo 2.1.2j"
#define PACKAGE_BUGREPORT "address@hidden"
#define PACKAGE "espresso"
#define VERSION "2.1.2j"
#define MPI "lam"
#define MDINLINE static inline
#define USE_NON_CONST 1
#define FFTW 3
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_ARPA_INET_H 1
#define HAVE_FCNTL_H 1
#define HAVE_FLOAT_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_LIMITS_H 1
#define HAVE_NETDB_H 1
#define HAVE_NETINET_IN_H 1
#define HAVE_STDDEF_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_STRINGS_H 1
#define HAVE_SYS_FILE_H 1
#define HAVE_SYS_SOCKET_H 1
#define HAVE_SYS_TIME_H 1
#define HAVE_UNISTD_H 1
#define TIME_WITH_SYS_TIME 1
#define HAVE_STDLIB_H 1
#define HAVE_MALLOC 0
#define malloc rpl_malloc
#define HAVE_STDLIB_H 1
#define HAVE_REALLOC 0
#define realloc rpl_realloc
#define HAVE_SYS_SELECT_H 1
#define HAVE_SYS_SOCKET_H 1
#define SELECT_TYPE_ARG1 int
#define SELECT_TYPE_ARG234 (fd_set *)
#define SELECT_TYPE_ARG5 (struct timeval *)
#define RETSIGTYPE void
#define HAVE_ATEXIT 1
#define HAVE_FLOOR 1
#define HAVE_GETCWD 1
#define HAVE_GETHOSTBYNAME 1
#define HAVE_MEMSET 1
#define HAVE_POW 1
#define HAVE_RINT 1
#define HAVE_SELECT 1
#define HAVE_SOCKET 1
#define HAVE_SQRT 1
#define LAST_CHANGE "March 31st, 2009"
configure-ac: exit 0
- [ESPResSo] MPI run problem,
İbrahim İnanç <=