Hi JN,
Thanks for your help. I've updated my gcc to version 7.3.1 and I can
pass the configuring process. But I got a new error below:
[ 50%] Building CXX object
src/core/cluster_analysis/CMakeFiles/cluster_analysis.dir/ClusterStructure.cpp.o
In file included from
/home/zhsh/sourcecode/espresso410/espresso/src/core/electrostatics_magnetostatics/p3m.hpp:58:0,
from
/home/zhsh/sourcecode/espresso410/espresso/src/core/electrostatics_magnetostatics/coulomb_inline.hpp:32,
from
/home/zhsh/sourcecode/espresso410/espresso/src/core/bonded_interactions/bonded_coulomb_sr.hpp:36,
from
/home/zhsh/sourcecode/espresso410/espresso/src/core/energy_inline.hpp:61,
from
/home/zhsh/sourcecode/espresso410/espresso/src/core/pair_criteria/pair_criteria.hpp:22,
from
/home/zhsh/sourcecode/espresso410/espresso/src/core/cluster_analysis/ClusterStructure.hpp:23,
from
/home/zhsh/sourcecode/espresso410/espresso/src/core/cluster_analysis/ClusterStructure.cpp:19:
/home/zhsh/sourcecode/espresso410/espresso/src/core/electrostatics_magnetostatics/fft.hpp:51:10:
fatal error: fftw3.h: No such file or directory
#include <fftw3.h>
^~~~~~~~~
compilation terminated.
make[2]: ***
[src/core/cluster_analysis/CMakeFiles/cluster_analysis.dir/ClusterStructure.cpp.o]
Error 1
make[1]: ***
[src/core/cluster_analysis/CMakeFiles/cluster_analysis.dir/all] Error 2
make: *** [all] Error 2
It seems that there's something wrong with my fftw library. But I can
install espresso-4.0.2 with fftw successfully. Do you have any
suggestions for solving this problem?
Attached please find the output of cmake.
Best,
Shawn
Jean-Noël Grad <address@hidden
<mailto:address@hidden>> 于2019年10月3日周四 下午12:06写道：
Hi Shawn,
I just tried compiling espresso 4.1 on CentOS 7 with CMake 3.14.6
with a
C++ standard not recognized by my gcc v6.3.1 and CMake did throw a long
list of errors messages: "Target ... requires the language dialect
CXX..
but CMake does not know the compile flags to use to enable it". The
return code is 1. I can't figure out why your version of CMake doesn't
show that error nor display the compiler name and version.
In any case, you'll need to install a newer version of gcc, version
4.9.0 or later, to compile espresso 4.1.
Best,
JN
On 10/3/19 6:18 PM, Shawn wrote:
> Hi JN,
>
> My gcc version is 4.8.5, and my cmake version is 3.14.5. So I should
> update my gcc to newer version?
>
> Regards,
>
> Shawn
>
> *发件人: *Jean-Noël Grad <mailto:address@hidden
<mailto:address@hidden>>
> *发送时间: *2019年10月3日11:11
> *收件人: *address@hidden
<mailto:address@hidden>
<mailto:address@hidden
<mailto:address@hidden>>
> *主题: *Re: [ESPResSo-users] 回复: Problem with installation of
> espresso-4.1.0
>
> Hi Shawn,
>
> It looks like your compiler doesn't know the C++14 standard. For
example:
>
> > /home/zhsh/sourcecode/espresso/src/utils/include/utils/Vector.hpp:
>
> > error: parameter declared ‘auto’
>
> > [](auto ai, auto bi) { return ai * bi; });
>
> > ^
>
> > error: parameter declared ‘auto’
>
> > [](auto ai, auto bi) { return ai * bi; });
>
> > ^
>
> > error: ‘ai’ was not declared in this scope
>
> > [](auto ai, auto bi) { return ai * bi; });
>
> > ^
>
> > error: ‘bi’ was not declared in this scope
>
> > [](auto ai, auto bi) { return ai * bi; });
>
> > ^
>
> can be reproduced with gcc v4.8.5. Many of the other error
messages can
>
> be reproduced by more recent gcc versions with the C++11 flag. The
>
> minimal gcc version needed for espresso 4.1 is v4.9.0. Our build
system
>
> does not check for compiler version numbers, instead it checks the
>
> compiler is C++14-capable. I'm not sure why CMake did not fail. Also,
>
> the CMake output should have shown a line with the compiler
version, or
>
> the string "The CXX compiler identification is unknown".
>
> Could you please share with us your CMake version and gcc
version? The
>
> command lines are "gcc --version" and "cmake --version". If this
is an
>
> issue in CMake, we will have to add a few lines in our build system.
>
> Best,
>
> JN
>
> On 10/3/19 5:22 PM, Shawn wrote:
>
>> Hi JN,
>
>>
>
>> As you mentioned in your reply, I deleted the old folder of 4.0.2,
>
>> unpacked the files of 4.1.0 and tried to reinstall the newest
package,
>
>> but the errors still existed during the compilation. Attached
please
>
>> find the output.
>
>>
>
>> Mainly two problems:
>
>>
>
>> 1 fatal: Not a git repository (or any of the parent
directories): .git
>
>>
>
>> 2 At global scope:
>
>>
>
>> cc1plus: warning: unrecognized command line option
>
>> "-Wno-cast-function-type" [enabled by default]
>
>>
>
>> make[2]: *** [src/core/CMakeFiles/EspressoCore.dir/cells.cpp.o]
Error 1
>
>>
>
>> make[1]: *** [src/core/CMakeFiles/EspressoCore.dir/all] Error 2
>
>>
>
>> make: *** [all] Error 2
>
>>
>
>> Could you help me to figure out what’s the reason why I failed ?
>
>>
>
>> Thank you very much.
>
>>
>
>> Best,
>
>>
>
>> Shawn
>
>>
>
>> *发件人: *Jean-Noël Grad <mailto:address@hidden
<mailto:address@hidden>>
>
>> *发送时间: *2019年10月2日17:19
>
>> *收件人: *address@hidden
<mailto:address@hidden>
<mailto:address@hidden
<mailto:address@hidden>>
>
>> *主题: *Re: [ESPResSo-users] Problem with installation of
espresso-4.1.0
>
>>
>
>> Hi Shawn,
>
>>
>
>> The g++ error message is hard to interpret. The include paths
are wrong,
>
>>
>
>> there is an extra folder
/home/zhsh/sourcecode/espresso/src/core/utils
>
>>
>
>> that shouldn't exist, and the compiler options do not match what
we have
>
>>
>
>> in 4.1.0. Could it be that you accidentally unpacked the files
of the
>
>>
>
>> 4.1.0 release into the same folder where you unpacked the files
of the
>
>>
>
>> 4.0.2 release back in July?
>
>>
>
>> Best,
>
>>
>
>> JN
>
>>
>
>> On 10/2/19 8:47 PM, Shawn wrote:
>
>>
>
>>> Hello guys,
>
>>
>
>>> As the newest version of espresso released, I am trying to
install it on
>
>>
>
>>> my computer. But I got an fatal error when I tried to compile the
>
>>
>
>>> package. And I also failed after I ran the "make" command.
>
>>
>
>>> Attached please find the detailed output of the compilation. I
have used
>
>>
>
>>> the same script to install espresso-4.0.2 successfully, but
I've no idea
>
>>
>
>>> where these errors come from when I try to install
espresso-4.1.0. Can
>
>>
>
>>> someone help me out? Thank you.
>
>>
>
>>>
>
>>
>
>>> Best,
>
>>
>
>>> Shawn
>
>>
>
>>>
>
>>
>