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08/28: gnu: cutadapt: Update to 1.18.
From: |
Ricardo Wurmus |
Subject: |
08/28: gnu: cutadapt: Update to 1.18. |
Date: |
Sun, 21 Oct 2018 17:06:58 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 6b7260bad124d3d63ce5ae305d7b74da28e9a947
Author: Ricardo Wurmus <address@hidden>
Date: Sun Oct 21 12:57:53 2018 +0200
gnu: cutadapt: Update to 1.18.
* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.18.
[inputs]: Add python-dnaio.
---
gnu/packages/bioinformatics.scm | 9 +++++----
1 file changed, 5 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 58b29e2..995cbc7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1945,19 +1945,20 @@ files. The code was previously part of the cutadapt
tool.")
(define-public cutadapt
(package
(name "cutadapt")
- (version "1.16")
+ (version "1.18")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/marcelm/cutadapt.git")
(commit (string-append "v" version))))
- (file-name (string-append name "-" version "-checkout"))
+ (file-name (git-file-name name version))
(sha256
(base32
- "09pr02067jiks19nc0aby4xp70hhgvb554i2y1c04rv1m401w7q8"))))
+ "08bbfwyc0kvcd95jf2s95xiv9s3cbsxm39ydl0qck3fw3cviwxpg"))))
(build-system python-build-system)
(inputs
- `(("python-xopen" ,python-xopen)))
+ `(("python-dnaio" ,python-dnaio)
+ ("python-xopen" ,python-xopen)))
(native-inputs
`(("python-cython" ,python-cython)
("python-pytest" ,python-pytest)))
- 11/28: gnu: eolie: Update to 0.9.45., (continued)
- 11/28: gnu: eolie: Update to 0.9.45., Ricardo Wurmus, 2018/10/21
- 25/28: gnu: python-screed: Update to 1.0., Ricardo Wurmus, 2018/10/21
- 19/28: gnu: Add texlive-latex-examplep., Ricardo Wurmus, 2018/10/21
- 16/28: gnu: Add texlive-generic-listofitems., Ricardo Wurmus, 2018/10/21
- 15/28: gnu: Add texlive-latex-doi., Ricardo Wurmus, 2018/10/21
- 10/28: gnu: python-dendropy: Fetch from git., Ricardo Wurmus, 2018/10/21
- 09/28: gnu: python-py2bit: Update to 0.3.0., Ricardo Wurmus, 2018/10/21
- 21/28: gnu: eigensoft: Update to 7.2.1., Ricardo Wurmus, 2018/10/21
- 13/28: gnu: delly: Update to 0.7.9., Ricardo Wurmus, 2018/10/21
- 12/28: gnu: deeptools: Update to 3.1.3., Ricardo Wurmus, 2018/10/21
- 08/28: gnu: cutadapt: Update to 1.18.,
Ricardo Wurmus <=
- 06/28: gnu: crossmap: Update to 0.2.9., Ricardo Wurmus, 2018/10/21
- 04/28: gnu: Add python-bx-python., Ricardo Wurmus, 2018/10/21
- 07/28: gnu: Add python-dnaio., Ricardo Wurmus, 2018/10/21
- 02/28: gnu: bwa-pssm: Fetch from git., Ricardo Wurmus, 2018/10/21
- 05/28: gnu: python-twobitreader: Update to 3.1.6., Ricardo Wurmus, 2018/10/21
- 03/28: gnu: python2-bx-python: Update to 0.8.2., Ricardo Wurmus, 2018/10/21
- 01/28: gnu: tophat: Update to 2.1.1., Ricardo Wurmus, 2018/10/21